| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3662 |
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| Symbol | |
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| ID | 3963990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4081680 |
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| End bp | 4083461 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637918478 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_524893 |
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| Protein GI | 89902422 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAG CCGAGATAGC CGTGGCGCGC TCGCACATCG GCGTTTGGAG AGCGTTCGTG
GCGTCTAGTG AGTCCTACGC ACTAGTGCTT GAGGACGATG TCTGGTTTGA GCGTGGCTTT
GGGCGGATTC TCGAGCAAGC GTGGCGCGAG ATGGAGGATG CCCACCCCGC CGTTCCAATA
TTTGATGTCC TGTACGTGTC CTACAACGAG GTGCGATACG GTGCTCCAAA GGAAATACTT
TCGAAGAATG TGTTTCGCCC CGAGCGGGGT CTTTGGTACC TTTCCGGTTA CGTTCTTTCG
AAGAGAGGGG CTCAGGCGCT ACTTGATCTC CTGCCGTGTC GTGGCCCAGT TGACCTCTGG
ATTAATCAGA AGTTTCACGA ACTGAAAGTA CGCGCGTTGC GCCGCTCGGT AATCAACCAA
CGTCGGGATC TTCATTCGAC GAATTCGTAC TCGATCCTGC CGGCGCTGAG TGGAATTGGG
ATTCTTGATA GCGGTGACGC CGCGCTGTTT CATCGGTGGC CAACCCATGC TCCGGTTTTC
GCATTCGGCG TCCCTGGATC TGGGCTGTCA TCGCTTGCCA TGGCTTTGTC GATGCTTGGT
TATCGCTGCT GCAGCGATTT TGATAGGCTC CCGGAGTGCG AGTTAGAGAG ACTGCTTGCA
GGTCGTGCTG ATCGCGTTTT CGATGCTTAC GTCAACATAG ATTCGCTAAG ACCGCAGATA
CTGAGACTCA TTCAGCACTA CCCAGAGGCC AAGTACATAG TGATCGACGA CATAGTGACG
TCTGCTAGTC GCCACAATGA CGCCATACTA GGCGCCCTTG AAGGGGCTGA TGTCCTGCAT
CTGCATCGCG AACAGACAAG CAGTTGGCGG GCACTTTGCC AGCACTTAAA GCTGGCGCCA
CCGGACGCAC CATACCCGGC TGTTCACGAC ATTGGGTTGC GGAAGCACCA TCCAGCACAG
CGCGACGGGG AAATGGCCGC TCCTGCAAAA TGGCTTCGTC ACGATCCTTC GCCGTGGATT
GCGAAGCGAC GTGCAAATTG GGCGGGAATC GGCGCGGGTG TTGATGAGAG TCCAGAGTCG
TCAGTTCCCT TGCGGATGTG CTTCGAGGAC GATCTCGCCC AAATCGATTC CGCGCGATGG
CTTCAGCGAA ATGACACTTT CCCAGGGAAC CTCGGACTCT TTCGTCATGC TAACGTCACT
GCATCGGCGA GCGGTGGCCT CTCACTTTCA GTAATTGAGG AGCGACTTGG TGTTCGTAAT
TTTAGTGCAG CCGCTATCTC GAGTCGCGCA TGTTTCCTAT TCGGGCGCTT TGAAGCGATA
TTGCAAGCTA CGAGTGTTCC GGGGCTCGTG ACCGGGTTCT TTCTGCACCG CGACTCACCC
CGACAGGAGA TCGATGTAGA AATACTAGGG AATCAGCCAG ACCAGCTATT AGTCAATGTC
TTCTACAACC CTGGCGGCGA GAGGACCAAG TTTGACTACG GGTATCGGGG AACGCCCGCC
GTCATCAAGT TGGGATTCGA CGCGTCAAGG GCCTTGCATC GATTCGCGAT CGAATGGACT
CCCAACGAGA TCAGGTGGTT CGTGGACCAA AAGTTGGTTC ACTGTCGCGC AACATGGAAC
CCCACACCGA TTCCACACCT ACCGATGACG TTACACGTAA ATACTTGGCC GGCCCGCTCA
AGAGAGTTCG CAGGCCGGCT AGCAGTCCGC GCACTACCTG CTTCATCGTT GCTGCATCGA
GTCGCGGTTG ATGCCTACAT CGCGGACGCT CAGTCTCTTT AA
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| Protein sequence | MTQAEIAVAR SHIGVWRAFV ASSESYALVL EDDVWFERGF GRILEQAWRE MEDAHPAVPI
FDVLYVSYNE VRYGAPKEIL SKNVFRPERG LWYLSGYVLS KRGAQALLDL LPCRGPVDLW
INQKFHELKV RALRRSVINQ RRDLHSTNSY SILPALSGIG ILDSGDAALF HRWPTHAPVF
AFGVPGSGLS SLAMALSMLG YRCCSDFDRL PECELERLLA GRADRVFDAY VNIDSLRPQI
LRLIQHYPEA KYIVIDDIVT SASRHNDAIL GALEGADVLH LHREQTSSWR ALCQHLKLAP
PDAPYPAVHD IGLRKHHPAQ RDGEMAAPAK WLRHDPSPWI AKRRANWAGI GAGVDESPES
SVPLRMCFED DLAQIDSARW LQRNDTFPGN LGLFRHANVT ASASGGLSLS VIEERLGVRN
FSAAAISSRA CFLFGRFEAI LQATSVPGLV TGFFLHRDSP RQEIDVEILG NQPDQLLVNV
FYNPGGERTK FDYGYRGTPA VIKLGFDASR ALHRFAIEWT PNEIRWFVDQ KLVHCRATWN
PTPIPHLPMT LHVNTWPARS REFAGRLAVR ALPASSLLHR VAVDAYIADA QSL
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