Gene Rfer_3659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3659 
Symbol 
ID3963987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4077067 
End bp4078287 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content60% 
IMG OID637918475 
Productmajor facilitator transporter 
Protein accessionYP_524890 
Protein GI89902419 
COG category[R] General function prediction only 
COG ID[COG2270] Permeases of the major facilitator superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAGC CTGTCTCTAA TGAGCCCGCA GCAGAAGTCA GCTCCCCGGA ACTTCGGCAA 
CGAATTCACC CCGACGTGCT CAAGCTCGGC CTGGTGAGTT TTCTCACAGA CCTGAGCTCA
GAGATGATTT TTTCAGTGTT CGCCATCTTC TTCACCACGG TGGCCGGCGC CTCCAGCGCG
TTGTTGGGGC TGATCGAAGG CCTGGCGGAT TTTTCCGCTT CTTCGCTGAA TTACCTGGCG
GGCTGGCTGT CGGACCGCAG CGGGCGGCGC AAGTGGCTGG CTACGGCTGG CTACGGCTTT
TCCACACTGG CCAAACTCAT TCTTCTTGCA TCGTCGTCCG TTCTGGGTCT GAGCATCTTT
CGCGTGATTG AGCGGCTGGG CAAAGGGTTT CGCGGGCCGC CACGCGATGC CTGGCTGTCG
TCCATTGCCG TGAAGGAGTC ACGGGGGTTT GCATTCGGCG TGCACAAGGC GCTCGATAAG
TCAGGCGCAG TGCTCGGGCC GCTGGTGGCC TATGGACTGC TGTCCTGGCT GGGGGAGTCG
GCCAGCACCT ATAGAGCTCT CTTTTTGGTG GCCTTTGTGC CCGCAGTGAT CAGCGTGTTG
GTTCTCACGC GCATCCCGGA TCAGCCCGGC GTTCCCCATG AACGTGAGAG CATCGGCCAG
AACTGGCAGC AACTCAGCCC TGGCTTCAAG CGCTTTCTGA TTCCAGCAGG CGTTTTTGCG
CTGGCGTATT TCAGTCTCGG GTTCATCCTG CTCAAGGCCC ATGCCGTGGG CTTTGGCGTG
ACCGACATCG TGCTGCTTTA CGCGCTGTTC AACATCACTT GCGTTGTGTC GGCGCCCCTG
GTGGGCAAAC TCGGTGACAA GATTGGGCGC AGCCGCATCA TCGTGTTGAG CTACGCAATC
TATGCCGTCA TCAACCTGTG GTTAGTGGTG GCCAGCAGCC GCTGGGAGAT GGTGGCCTTA
TTCGCGATTT ACGGGCTGTT TTATGCGATT GACGAGTCGC AGAGCAAGGC ATTCATCGCG
GACCTCGAAC CCGAGCGCCG TGCCACTGCT GTAGGCGTCT ACAACTTTGT TACCGGATTG
CTGTACCTGC CTGCATCGCT GGTGGCAGGC GCCTTGTGGG CCTTGACGCC AGGTCTGGCG
TTCGCGATGG CAGTGGCGCT GTCGCTGGCG GCCATGGTGG TCTTCGCGGT CTTGCGGCCT
GTTGCATCTA CTCCCGCATG A
 
Protein sequence
MNQPVSNEPA AEVSSPELRQ RIHPDVLKLG LVSFLTDLSS EMIFSVFAIF FTTVAGASSA 
LLGLIEGLAD FSASSLNYLA GWLSDRSGRR KWLATAGYGF STLAKLILLA SSSVLGLSIF
RVIERLGKGF RGPPRDAWLS SIAVKESRGF AFGVHKALDK SGAVLGPLVA YGLLSWLGES
ASTYRALFLV AFVPAVISVL VLTRIPDQPG VPHERESIGQ NWQQLSPGFK RFLIPAGVFA
LAYFSLGFIL LKAHAVGFGV TDIVLLYALF NITCVVSAPL VGKLGDKIGR SRIIVLSYAI
YAVINLWLVV ASSRWEMVAL FAIYGLFYAI DESQSKAFIA DLEPERRATA VGVYNFVTGL
LYLPASLVAG ALWALTPGLA FAMAVALSLA AMVVFAVLRP VASTPA