| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3650 |
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| Symbol | |
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| ID | 3963978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4065109 |
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| End bp | 4067736 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637918468 |
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| Product | 2-oxoacid dehydrogenase subunit E1 |
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| Protein accession | YP_524883 |
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| Protein GI | 89902412 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type
[TIGR03186] alpha-ketoglutarate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGACG ATCTTCAACC CGACATGATG GCGCCCGATC CTGATCCGCT GGAAACGGCG
GAATGGCGTG ATGCTTTTTT GGCGCTGCTG CAACGCGAGG GTGCGCCGCG TGCGCGCCAG
ATGCTGGACC AGCTGGCCCA GCTGGCACGC GGCCAGCGCG TGGGTTGGCA GCCCGAGCTG
GCCACGCCCT ACATCAACAC CATCGGTGTG GATCAGCAAC CGGTGTTTCC GGGCGATTTG
GCGATGGAAG AGCGCCTGGC CTCCATGGTG CGCTGGAACG CCCTGGCGAT GGTGGTGCGC
GCCAACCAGG CTTACGGCGA GCTCGGTGGC CACATTGCCA GCTACGCCAG CGCGGCGGAC
TTGTTCGAGG TCGGGTTCAA CCACTTCTTT CGCGCGCGCA GCGCGGAAGA TGCGGGGGTC
GACGCGTCTT TGGGTGACCT GGTGTTTTTC CAGCCGCACA GCGCGCCAGG GGTTTATGCG
CGTGCCTTTC TGGAAGGGCG CTTCAGCGCC GAAGACTTGA CCTATTACCG CCAGGAGTTG
ACGGCACCGG CGGCCAGCAC CGGGCAAGGT GCGCGTGGCC TGTGCAGCTA CCCGCACCCC
TACTTGATGC CCGACTTCTG GCAGTTCCCG ACCGGCTCCA TGGGCATCGG CCCGATCAGC
TCGATTTACC ACGCGCGCTT CATGCGCTAC CTGACGCACC GCCAGTTGCT GGACTGCTCG
GCGCGCAAAG TGTGGGGCGT CTTCGGTGAT GGCGAGATGG ACGAGCCCGA AAGCATGTGC
GCCCTCACGC TGGCCGCGCG CGAGGGACTG GACAACCTGG TGTGGGTGGT CAACTGCAAC
CTGCAGCGCC TGGATGGCCC GGTGCGCGGC AACGGCCGCA TCATTGACGA GCTGGAAAAG
CTCTTTGCCG GTGCCGGCTG GAACGTCATC AAACTGGTCT GGGGCAGCGA TTGGGACGGC
CTGTTTGCCC GCGACGTGAC GGGAGCGCTG GTCAAAGCTT TTGCCAACAC GGTCGACGGC
CAGATGCAGA CCTTTGCCGC CAAGGACGGG CGCTTTAACC GTGACACTTT TTTTGGCCAG
AACGAAGAAC TGGCGCGTCT GGCCCAGGGC ATGACCGACG AGCAGATCGA CCGCCTCAAG
CGCGGTGGCC ACGACCTGGT GAAAATCCAC GCCGCCTACG CCGCGGCGGC GCAGCACAAG
GGCCAGCCGA CCGTGATTCT GGCGCACACC AAGAAAGGCT TTGGCATGGG CAGCGCGGGT
CAGGGCAAGA TGACCACACA CAGCCAGAAG ACGTTTGACG AGGCTGACCT GATCGCGTTT
CGCAACCGCT TTAACCTGCC CCTGACGGAC GAACAAGTCA AAAGCCTGGC GTTCTACAGA
CCCCCGGCCA GCAGCCCCGA GATGCAGTAC CTGCAGGCGC AGCGCCAGCG CCTGGGCGGC
TATTTGCCCC AACGTTACAC GGGCTGCGAC AAGGTGCCGG TGCCCGGCAT CGAAACCTAC
GCCCAGTTTG CGCTCAAGGC CAATGGCAAA GTCATGAGCA CCACGATGGC CGCTGTGCGC
CTGCTGGGCA ACCTGCTCAA GGACAAGGCG CTGAGCCCGC GCATCGTGCC GATCGTTGCG
GACGAGGCCC GCACCTTCGG CATGGCCAGT CTGTTCAAGC AAATCGGCAT TTACTCCAGT
GTCGGCCAGC GTTATGCGCC CGAAGACATT GGCTCGGTGC TGAGCTACCG TGAGGCGCTG
GACGGTCAGA TCATGGAAGA AGGCATTTCC GAAGCCGGTG CGCTGGCCAG CTGGACCGCC
GCGGCCACCA GCTACAGCGT GCACGGCCTG GCCATGCTGC CCTTTTATAT CTACTACTCG
ATGTTTGGCT TCCAGCGCGT GGGTGACCAG ATCTGGGCGG CGGCCGATCA GCGGGCACGC
GGTTTCTTGC TGGGCGCCAC CTCGGGGCGC ACCACACTGG GCGGCGAGGG GCTGCAGCAC
CAGGACGGCA GCAGCCACCT GATGGCTGCC ACCATCCCGA ACTGCAAGGC ATACGACCCG
GCGTTCGCGG GCGAGCTGGC CGTGATCATT GACCACGGAA TGCGCGAGAT GATGGTCGAG
CAGAAGGACG TTTTCTACTA CGTCACGCTG ATGAACGAAA ACTACGCCCA GCCCGATCTG
CCAGCCGGCG CGGCACCCGA CGTGATTCGA GGTTGCTATA AATTTGCTAG CTACTCACGC
CTACCTGACG GGGGCCAGGG CTCAAAAACA TCAAAACATG TGGCCCTGCT GGGTTCGGGC
GCAATTTTGA CCGAGGTTAT CCAGGCGGCT GCGTTGCTGG CGCAGCAAGG CGTTGACGCA
GAGGTATTCA GTGTGACCAG TTGGAGCGAG CTGGCGCGCG ATGGTGCGGC AAGTCAAGAC
GCATTCATCG GGCGCCAAGT GGCCCACAGC CAAGGCCCGA TCATTGCTGC CACCGACTAC
GTGCGCGCGG TGCCTGAAAG TGTCCGGGCC TACCTGCCAC CGGGGCGTCG CTACGTGACC
CTGGGCACCG ACGGTTTTGG TCGCAGTGAC ACGCGGGCTG CCTTGCGCGG TTTTTTCGGG
GTGGATGCGG CCAGCATTGT GCGTGCGGCA TTGCTGAGCC TGGATTAA
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| Protein sequence | MKDDLQPDMM APDPDPLETA EWRDAFLALL QREGAPRARQ MLDQLAQLAR GQRVGWQPEL
ATPYINTIGV DQQPVFPGDL AMEERLASMV RWNALAMVVR ANQAYGELGG HIASYASAAD
LFEVGFNHFF RARSAEDAGV DASLGDLVFF QPHSAPGVYA RAFLEGRFSA EDLTYYRQEL
TAPAASTGQG ARGLCSYPHP YLMPDFWQFP TGSMGIGPIS SIYHARFMRY LTHRQLLDCS
ARKVWGVFGD GEMDEPESMC ALTLAAREGL DNLVWVVNCN LQRLDGPVRG NGRIIDELEK
LFAGAGWNVI KLVWGSDWDG LFARDVTGAL VKAFANTVDG QMQTFAAKDG RFNRDTFFGQ
NEELARLAQG MTDEQIDRLK RGGHDLVKIH AAYAAAAQHK GQPTVILAHT KKGFGMGSAG
QGKMTTHSQK TFDEADLIAF RNRFNLPLTD EQVKSLAFYR PPASSPEMQY LQAQRQRLGG
YLPQRYTGCD KVPVPGIETY AQFALKANGK VMSTTMAAVR LLGNLLKDKA LSPRIVPIVA
DEARTFGMAS LFKQIGIYSS VGQRYAPEDI GSVLSYREAL DGQIMEEGIS EAGALASWTA
AATSYSVHGL AMLPFYIYYS MFGFQRVGDQ IWAAADQRAR GFLLGATSGR TTLGGEGLQH
QDGSSHLMAA TIPNCKAYDP AFAGELAVII DHGMREMMVE QKDVFYYVTL MNENYAQPDL
PAGAAPDVIR GCYKFASYSR LPDGGQGSKT SKHVALLGSG AILTEVIQAA ALLAQQGVDA
EVFSVTSWSE LARDGAASQD AFIGRQVAHS QGPIIAATDY VRAVPESVRA YLPPGRRYVT
LGTDGFGRSD TRAALRGFFG VDAASIVRAA LLSLD
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