Gene Rfer_3622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3622 
Symbol 
ID3962715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp4038812 
End bp4039522 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content63% 
IMG OID637918441 
ProductTetR family transcriptional regulator 
Protein accessionYP_524856 
Protein GI89902385 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.311842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTCA TCGACAAACC TTCCAAGCAG CGCACCGAGG TGCGTCAGGC CAGCCTGGTT 
GAAGCCGCGT TGCGGCTGGC GGCGCAGCGC AGCCCGGCGG ACATCACGAC GGGCGACCTG 
GCGCAGGCGG TCGGCATCAC CCAAGGCGCC GTGTTTCGGC ACTTTGCCAG CAAAGAAGCC 
ATCTGGCTGG CGGTGCTGGA CTGGGTTACT CAAACGCTGA TGAGCCGCCT GCAAGCTGCC 
GCGCAAGGGG CCCAGGCAGC AGAATCCGCC GCGATGAAGA TCCCGCCCAG CGGACCCGAA 
TCAGCCCAAC CCGCCCTGGT TTCACCAAGC TCGGGCTCAA ACCGCTCGGC ACTGACCGCC 
CTGCAAGCTG TCTTCATGGC CCACGTGGAT TTTGTGGTGA CGCACCCCGG CGTGCCGCGC 
GTGATTTTTC AGGAGTTGCA ACAGCCACAC GACACCGCCC TCAAAGCGCG CGTGCGGGAT 
CTGCTGCTGC AGTACCGGCG CTTGCTCATG CAACTCTTGC AGCAAGTCCA AACACAAAAA 
GCGATGGCGC CAGATATCGA TTTACGGGCT GCTGCCGTTC TGTTCATCGG CTCGGTGCAG 
GGGCTGGTGA TGCAAGCAAT GATCTCTGGT GATGTGCCCG CCATGGCCGT ACAAGCCCCT 
GGCGTATTTG CCATCTTCCA GCGCGGCCTG CTTGCCCAAG CGCCCCTTTG A
 
Protein sequence
MQVIDKPSKQ RTEVRQASLV EAALRLAAQR SPADITTGDL AQAVGITQGA VFRHFASKEA 
IWLAVLDWVT QTLMSRLQAA AQGAQAAESA AMKIPPSGPE SAQPALVSPS SGSNRSALTA 
LQAVFMAHVD FVVTHPGVPR VIFQELQQPH DTALKARVRD LLLQYRRLLM QLLQQVQTQK 
AMAPDIDLRA AAVLFIGSVQ GLVMQAMISG DVPAMAVQAP GVFAIFQRGL LAQAPL