Gene Rfer_3619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3619 
Symbol 
ID3962712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4034501 
End bp4036612 
Gene Length2112 bp 
Protein Length703 aa 
Translation table11 
GC content66% 
IMG OID637918438 
Productmolybdopterin oxidoreductase 
Protein accessionYP_524853 
Protein GI89902382 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCATT CCAAGTCCAT GAATCCAAGC TCCTCCCCCC TCTCTGACGC CACCCCGACC 
CAGGTGCTGG GCGCCTGCCC GCACGACTGT CCCGACACTT GCTCCATGCT GACCACCGTC
GCCGGCGGCA TCGCCATCAA GGTGCAGGGC AACCCGGCCC ATCCGCATAC CGACGGCGCC
CTGTGCACCA AGGTGTCGCG CTATACCGAG CGCACCTACC ACCCCGAGCG CCTGCTGCAC
CCGCTCAAAC GTGTCGGCCC CAAGGGCGCC GGCCAGTTCG AGCGCGTGAG CTGGGACGAC
GCGTTGCAGG ACATCGCGAC CCGACTCAAA ACCATCTCCA GCCGGGGGCC GCAAGCGGCG
CAAGCCATCC TGCCCTACAG CTACGCCGGC ACCATGGGGC TGATCCAGGG CGACGGCATG
TCGGCCCGCT TCTTCCACAA ACTGGGCGCC TCCCTGCTGG ACCGCACCAT CTGCGCCGCC
GCTGGCGGCG AGGGGCTGAC CCAGACCCTG GGCGGCAAGG TCGGCATGCG GGTCGAATTT
TTTGCCGAAG CCCAACTGAT CCTGATCTGG GGCAGCAACT CGATTGCCAG CAACCTGCAC
TTCTGGCGCT ACGCCCAGGT GGCCAAGCGC AACGGCGCCA AGCTGATCTG CATTGACCCG
CGTTTGAGCG AAACGGCGGA TAAATGCCAC GAACACATCG CGCTGCTGCC CGGCACCGAC
GGCGCGCTGG CGCTGGCGCT GATGCACGAG CTCATCACCC ACGACTGGCT CGATCACGAC
TACCTGACGC ACTACACGCT GGGTTGGGAC CTGCTGCGTG AGCGGGCGCT GCAATGGTCA
CCGGAGCGGG CCGCGGGGGT GTGCGGCATC AACCCCGAGC AGATCCGTGC CCTGGCCCGT
GACTACGGTG CCTGTGCGGC CAGCCGTGCG CCGGCGGCGA TCCGCATCAA CTATGGGATG
CAACGCGTCC ACGGCGGCGG CAATGCCGTG CGCCTGATTG CCTCTCTACC CGCCTTGATT
GGCGCCTGGC GCCACCGCGC CGGCGGTGTC CTGCTCTCCA GTTCGAGCAT GTTCCCGGTT
AAAAAAGCGG CACTGCAGCG GCCCGACCTG CTGGCCGGCA AAACCCCGCG CACCCTCAAC
ATGAGCACCA TTGGGGACGA GCTGCTGCGC CCGGCCAGCA CGGCTTTCGG CCCGGCGATT
GAGGCGCTGA TCGTCTACAA CAGCAACCCG GTGGCGGTCG CGCCCGAGTC GGCCAAGGTG
GTGCAGGGCT TCGCGCGGGA AGACCTCTTC ACTGTGGTGC TGGAGCACTT CCAGACCGAC
ACCGCCGACT ATGCCGACTA CATCCTGCCC GCCACGACGC AACTGGAGCA TTGGGACGTG
CATTCGAGCT ACGGCCACAC CGATGCGCTA CTCAATCGCC CGGCCATTGC GCCGCTGGGC
GAGGCCAAAC CCAACACGCA GATTTTTCGC GAGCTGGCCG CGCGCATGGG TTTCACCGAG
CCCTGCTTTG CCGACGATGA CGTGGCGCTA TGCCGCATGG CCTATGGCGA CGCCGTTGAT
TTTGACGAGT TGCTCCATCA CGGCTTTGCC ACGCTGAAAA CACCCGAGGC ACCATTTGCC
CAGGGCAAGT TCCCCACGCC CTCCGGCAAA TGCGAGTTTT TCAGCGCCCG GCTGGCGGCG
CAGGGGCTGG ACGGCCTGCC CGACCATGTG CCCAACTACG AAGCGTTTGC GTCGTCGCCG
CTGTATCCGC TGGCCATGAT CTCGCCACCC GCGCGCAATT TCCTGAACTC CACGTTCGTC
AATGTGCGGA GCCTGCAGGA CTCGGAGCGC GAGCCGCTGC TGGAAATGCA TGCGACCGAT
GCGGCGGCGC GTGGCATCCA GAGCGGCGAC GTCGTGCGTG TCTTCAACGC CCGTGGCGAG
TACCGCTGCA AGGCAGAAAT CTCCCGGCGC GCGCGCCCCG GTGTAGTCAA TGGCCTGGGC
GTGTGGTGGC GCAAGCTGGG CCTGAGCGGC ACCAATGTGA ATCAGCTCAC CAGTCAAAAC
CTGACCGACC TGGGCGGCGG CCCCACGTTT TACGACTGCC TGGTGCAGGT GATGGCGGAC
CAGGCTTCAT GA
 
Protein sequence
MPHSKSMNPS SSPLSDATPT QVLGACPHDC PDTCSMLTTV AGGIAIKVQG NPAHPHTDGA 
LCTKVSRYTE RTYHPERLLH PLKRVGPKGA GQFERVSWDD ALQDIATRLK TISSRGPQAA
QAILPYSYAG TMGLIQGDGM SARFFHKLGA SLLDRTICAA AGGEGLTQTL GGKVGMRVEF
FAEAQLILIW GSNSIASNLH FWRYAQVAKR NGAKLICIDP RLSETADKCH EHIALLPGTD
GALALALMHE LITHDWLDHD YLTHYTLGWD LLRERALQWS PERAAGVCGI NPEQIRALAR
DYGACAASRA PAAIRINYGM QRVHGGGNAV RLIASLPALI GAWRHRAGGV LLSSSSMFPV
KKAALQRPDL LAGKTPRTLN MSTIGDELLR PASTAFGPAI EALIVYNSNP VAVAPESAKV
VQGFAREDLF TVVLEHFQTD TADYADYILP ATTQLEHWDV HSSYGHTDAL LNRPAIAPLG
EAKPNTQIFR ELAARMGFTE PCFADDDVAL CRMAYGDAVD FDELLHHGFA TLKTPEAPFA
QGKFPTPSGK CEFFSARLAA QGLDGLPDHV PNYEAFASSP LYPLAMISPP ARNFLNSTFV
NVRSLQDSER EPLLEMHATD AAARGIQSGD VVRVFNARGE YRCKAEISRR ARPGVVNGLG
VWWRKLGLSG TNVNQLTSQN LTDLGGGPTF YDCLVQVMAD QAS