Gene Rfer_3604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3604 
Symbol 
ID3962619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4014224 
End bp4015291 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content65% 
IMG OID637918423 
Productthreonine aldolase 
Protein accessionYP_524838 
Protein GI89902367 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.51138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCATA AAACACAAAC TATCAAAGTT GACCTGCGCA GCGACACCGT GACGCAGCCG 
ACCCCTGCCA TGCGCGCGGC CATGCTGGCG GCCCCGCTGG GCGACGACGT GTTTGGCGAC
GACCCCAGCG TCAACGCCTT GCAGGACAAA CTGGCGGCGC TGCTGGGTTT TGAGGCGGCG
CTGTTTGTGC CCACCGGCAC GCAGAGCAAT TTGTGCGCCA TCCTGGCCCA TTGCCAGCGC
GGCGACGAAT ACATCGTGGG CCAATACGCG CATTGCTATC GCTGGGAAGG CGGCGGCGCG
GCGGTGTTTG GCAGCGTGCA GCCGCAGCCT TTGAACCACC AGCCTGATGG CACTTTGCTG
CTGGCGGATA TTGAAGCGGC CATCAAACCC GATGACGAGC ACTTCGCCCG CACCCGGCTG
CTGGCGCTGG AAAACACGTG GGGCGGCAAG CTGTTGCCGT TTGATTACGT GCAGCAGGCC
ACTGAGCTGG CCAGGTCCAG AGGCCTGAGC CGTCATCTGG ACGGCGCCCG CTTGTTCAAC
GCGGCGGTTG CGCAGGCGGC CGCCCACGGC ACTGACGCGC TGCTTGAGGC GCGTCGCATC
GCCCAGTGTT TTGACAGCGT TTCGGTCTGC CTGAGCAAGG GCCTGGGCGC GCCGGTCGGT
TCGGTCTTGT GCGGCCGCCA GGACTTCATC GCCCGCGCAC ACCGCATCCG CAAAATGGCG
GGCGGCGGCA TGCGCCAGTC AGGTCTGCTG GCAGCGGCGG GCACGTACGC GCTGGACCAT
CACGTTGCCA GGCTTGCCGA CGACCACGCG CTCATCAGGC GGCTGGCTGA GGGCCTGAGC
AAGCTGGCAG GCCTGGTGGT GGAGCCGGCG CAGACCAATA TCTTGTTTGT CGATCTGGTG
GGTGAGGCCA AAGCGCGCGC AGCGGAGTTG ATCCCCTACC TGGCGGCGCG TGGCATTCTG
ATCACCGGCT TGTACCGCCT GCGTTTTGTG GCGCATCTGG ATGTCGATGC GGCGGGTATT
GACCACACCG TGGCGGCGAT GCGCGATTTT TTAATGGGCA GGCCGTGA
 
Protein sequence
MTHKTQTIKV DLRSDTVTQP TPAMRAAMLA APLGDDVFGD DPSVNALQDK LAALLGFEAA 
LFVPTGTQSN LCAILAHCQR GDEYIVGQYA HCYRWEGGGA AVFGSVQPQP LNHQPDGTLL
LADIEAAIKP DDEHFARTRL LALENTWGGK LLPFDYVQQA TELARSRGLS RHLDGARLFN
AAVAQAAAHG TDALLEARRI AQCFDSVSVC LSKGLGAPVG SVLCGRQDFI ARAHRIRKMA
GGGMRQSGLL AAAGTYALDH HVARLADDHA LIRRLAEGLS KLAGLVVEPA QTNILFVDLV
GEAKARAAEL IPYLAARGIL ITGLYRLRFV AHLDVDAAGI DHTVAAMRDF LMGRP