Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3604 |
Symbol | |
ID | 3962619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4014224 |
End bp | 4015291 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637918423 |
Product | threonine aldolase |
Protein accession | YP_524838 |
Protein GI | 89902367 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2008] Threonine aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.51138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCATA AAACACAAAC TATCAAAGTT GACCTGCGCA GCGACACCGT GACGCAGCCG ACCCCTGCCA TGCGCGCGGC CATGCTGGCG GCCCCGCTGG GCGACGACGT GTTTGGCGAC GACCCCAGCG TCAACGCCTT GCAGGACAAA CTGGCGGCGC TGCTGGGTTT TGAGGCGGCG CTGTTTGTGC CCACCGGCAC GCAGAGCAAT TTGTGCGCCA TCCTGGCCCA TTGCCAGCGC GGCGACGAAT ACATCGTGGG CCAATACGCG CATTGCTATC GCTGGGAAGG CGGCGGCGCG GCGGTGTTTG GCAGCGTGCA GCCGCAGCCT TTGAACCACC AGCCTGATGG CACTTTGCTG CTGGCGGATA TTGAAGCGGC CATCAAACCC GATGACGAGC ACTTCGCCCG CACCCGGCTG CTGGCGCTGG AAAACACGTG GGGCGGCAAG CTGTTGCCGT TTGATTACGT GCAGCAGGCC ACTGAGCTGG CCAGGTCCAG AGGCCTGAGC CGTCATCTGG ACGGCGCCCG CTTGTTCAAC GCGGCGGTTG CGCAGGCGGC CGCCCACGGC ACTGACGCGC TGCTTGAGGC GCGTCGCATC GCCCAGTGTT TTGACAGCGT TTCGGTCTGC CTGAGCAAGG GCCTGGGCGC GCCGGTCGGT TCGGTCTTGT GCGGCCGCCA GGACTTCATC GCCCGCGCAC ACCGCATCCG CAAAATGGCG GGCGGCGGCA TGCGCCAGTC AGGTCTGCTG GCAGCGGCGG GCACGTACGC GCTGGACCAT CACGTTGCCA GGCTTGCCGA CGACCACGCG CTCATCAGGC GGCTGGCTGA GGGCCTGAGC AAGCTGGCAG GCCTGGTGGT GGAGCCGGCG CAGACCAATA TCTTGTTTGT CGATCTGGTG GGTGAGGCCA AAGCGCGCGC AGCGGAGTTG ATCCCCTACC TGGCGGCGCG TGGCATTCTG ATCACCGGCT TGTACCGCCT GCGTTTTGTG GCGCATCTGG ATGTCGATGC GGCGGGTATT GACCACACCG TGGCGGCGAT GCGCGATTTT TTAATGGGCA GGCCGTGA
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Protein sequence | MTHKTQTIKV DLRSDTVTQP TPAMRAAMLA APLGDDVFGD DPSVNALQDK LAALLGFEAA LFVPTGTQSN LCAILAHCQR GDEYIVGQYA HCYRWEGGGA AVFGSVQPQP LNHQPDGTLL LADIEAAIKP DDEHFARTRL LALENTWGGK LLPFDYVQQA TELARSRGLS RHLDGARLFN AAVAQAAAHG TDALLEARRI AQCFDSVSVC LSKGLGAPVG SVLCGRQDFI ARAHRIRKMA GGGMRQSGLL AAAGTYALDH HVARLADDHA LIRRLAEGLS KLAGLVVEPA QTNILFVDLV GEAKARAAEL IPYLAARGIL ITGLYRLRFV AHLDVDAAGI DHTVAAMRDF LMGRP
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