Gene Rfer_3601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3601 
SymboltrpC 
ID3962616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4012081 
End bp4012875 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content61% 
IMG OID637918421 
Productindole-3-glycerol-phosphate synthase 
Protein accessionYP_524836 
Protein GI89902365 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.147374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGACA TTCTGGAAAA AATTGTGGCC GTCAAACGCC AGGAAATCGC AGCTGCGATT 
GCCCGCAAAC CCTTGACCGC GATGCGTGCC GATGCCGAGT CGCGTGTGTT GACACGGGAT
TTTGTCGCCG CCCTGCGCGG CAAGATCGCC GCCGGGCAGC CCGCCGTGAT TGCCGAGATC
AAAAAATCCA GCCCATCCAA GGGTGTGCTG CGCGAGGATT TCATTCCCGC CGATATAGCG
CAAAGCTATG CGGAGCATGG GGCCGCCTGT TTGTCGGTAC TCACCGACCT GCAGTTTTTC
CGGGGTTGTA TTGATTACCT CAAGCAGGCC CGCGCCTCCT GCCCGTTGCC GGTGCTGCGC
AAGGACTTCA TGCTGGACGC CTATCAAATT TATGAATCGC GCGCTTGCGG GGCCGATGCC
GTATTGCTGA TTGCGGCCAT TCTGGATGAT GCGCAAATGA AAGACCTTGA AGCGATTGCG
CGCAGCCTGG ACATGGCGGT GCTGGTGGAG GTGCACGATG CGCCCGAGCT GGCGCGTGCG
TTGCAGCTCA AAACGCCGCT GATCGGCATC AACAACCGCA ATCTCAAAAC TTTTGAGGTC
TCGCTGGACA CCACCTTGAC GCTCATGCGC GAATTGCCTG CCGACCGTTT GCTGGTGTGT
GAGAGTGGCA TCCACACCCG CGACGACGTG CTGCGCATGG GGGCGGCCGG TGTCAACGCG
TTCCTGGTGG GTGAGGCTTT CATGCGCGCT CCCGACCCGG GTCTGGCTTT GGCGGAGCTG
TTTGCCACGG CCTGA
 
Protein sequence
MTDILEKIVA VKRQEIAAAI ARKPLTAMRA DAESRVLTRD FVAALRGKIA AGQPAVIAEI 
KKSSPSKGVL REDFIPADIA QSYAEHGAAC LSVLTDLQFF RGCIDYLKQA RASCPLPVLR
KDFMLDAYQI YESRACGADA VLLIAAILDD AQMKDLEAIA RSLDMAVLVE VHDAPELARA
LQLKTPLIGI NNRNLKTFEV SLDTTLTLMR ELPADRLLVC ESGIHTRDDV LRMGAAGVNA
FLVGEAFMRA PDPGLALAEL FATA