Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3601 |
Symbol | trpC |
ID | 3962616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4012081 |
End bp | 4012875 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637918421 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_524836 |
Protein GI | 89902365 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.147374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGACA TTCTGGAAAA AATTGTGGCC GTCAAACGCC AGGAAATCGC AGCTGCGATT GCCCGCAAAC CCTTGACCGC GATGCGTGCC GATGCCGAGT CGCGTGTGTT GACACGGGAT TTTGTCGCCG CCCTGCGCGG CAAGATCGCC GCCGGGCAGC CCGCCGTGAT TGCCGAGATC AAAAAATCCA GCCCATCCAA GGGTGTGCTG CGCGAGGATT TCATTCCCGC CGATATAGCG CAAAGCTATG CGGAGCATGG GGCCGCCTGT TTGTCGGTAC TCACCGACCT GCAGTTTTTC CGGGGTTGTA TTGATTACCT CAAGCAGGCC CGCGCCTCCT GCCCGTTGCC GGTGCTGCGC AAGGACTTCA TGCTGGACGC CTATCAAATT TATGAATCGC GCGCTTGCGG GGCCGATGCC GTATTGCTGA TTGCGGCCAT TCTGGATGAT GCGCAAATGA AAGACCTTGA AGCGATTGCG CGCAGCCTGG ACATGGCGGT GCTGGTGGAG GTGCACGATG CGCCCGAGCT GGCGCGTGCG TTGCAGCTCA AAACGCCGCT GATCGGCATC AACAACCGCA ATCTCAAAAC TTTTGAGGTC TCGCTGGACA CCACCTTGAC GCTCATGCGC GAATTGCCTG CCGACCGTTT GCTGGTGTGT GAGAGTGGCA TCCACACCCG CGACGACGTG CTGCGCATGG GGGCGGCCGG TGTCAACGCG TTCCTGGTGG GTGAGGCTTT CATGCGCGCT CCCGACCCGG GTCTGGCTTT GGCGGAGCTG TTTGCCACGG CCTGA
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Protein sequence | MTDILEKIVA VKRQEIAAAI ARKPLTAMRA DAESRVLTRD FVAALRGKIA AGQPAVIAEI KKSSPSKGVL REDFIPADIA QSYAEHGAAC LSVLTDLQFF RGCIDYLKQA RASCPLPVLR KDFMLDAYQI YESRACGADA VLLIAAILDD AQMKDLEAIA RSLDMAVLVE VHDAPELARA LQLKTPLIGI NNRNLKTFEV SLDTTLTLMR ELPADRLLVC ESGIHTRDDV LRMGAAGVNA FLVGEAFMRA PDPGLALAEL FATA
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