Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3599 |
Symbol | |
ID | 3962611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4009644 |
End bp | 4010834 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637918416 |
Product | elongation factor Tu |
Protein accession | YP_524834 |
Protein GI | 89902363 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0100711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAAG AAAAATTTTC GCGTAGCAAG CCGCACGTCA ACGTCGGCAC CATTGGCCAC GTCGATCACG GCAAGACCAC CCTGACAGCG GCTATCACCA GCGTGCTGGC GGCCAAATTT GGCGGCACCG CCAAGGCCTA CGACCAGATC GATGCAGCGC CCGAAGAAAA AGCGCGCGGC ATCACCATCA ACACGGCCCA CGTCGAGTAC GAGACCGCCA ATCGCCATTA CGCCCACGTC GATTGCCCCG GCCACGCTGA CTATGTGAAG AACATGATCA CCGGCGCGGC GCAAATGGAC GGCGCCATTC TGGTCGTGTC CGCCGCTGAC GGCCCCATGC CGCAAACCCG CGAACACATC CTGCTGGCGC GCCAGGTCGG CGTGCCTTAC ATCATCGTGT TCCTGAACAA ATGCGACATG GTCGACGACG CCGAACTGCT CGAACTCGTT GAAATGGAAG TGCGTGAACT GCTCGACAAG TACGAGTTCC CGGGCGACAC CACCCCCATC ATCCATGGCT CGGCCAAACT CGCCATGGAA GGCGACAAAG GCCCCATGGG CGAACAAGCC ATCATGAAAC TCGCTGATGC GCTGGACAGC TACATTCCCC TGCCGGAACG TGCCATTGAT GGCGCCTTCC TGATGCCCGT CGAAGACGTG TTCTCGATCT CCGGTCGTGG CACCGTGGTG ACCGGCCGCG TTGAACGCGG CATCATCAAA GTCGGCGAAG AAATCGAAAT CGTCGGCATC CACGACACCC AAAAGACCAC CTGCACGGGC GTCGAAATGT TCCGCAAACT GCTCGACCAA GGTCAAGCGG GTGACAACGT CGGCATCTTG CTGCGCGGCA CCAAGCGTGA AGACGTGCAG CGCGGCCAAG TGCTGTGCAA GCCCGGTTCG ATCAAACCGC ACACCCACTT CACGGGCGAG ATCTATGTCT TGTCCAAAGA CGAAGGTGGC CGGCACACCC CGTTCTTCAA CAACTACCGT CCCCAGTTCT ACTTCCGTAC CACGGACGTG ACCGGTGCGA TCGAGTTGCC GGAAGGCAAA GAAATGGTGA TGCCGGGCGA CAACGTGTCG ATCATCGTCA AGCTGATCAA CCCGATCGCC ATGGAAGAAG GCCTGCGTTT CGCCATCCGC GAAGGTGGCA AGACGGTCGG TGCCGGTGTG GTTGCGAAGA TCATCGCATA G
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Protein sequence | MGKEKFSRSK PHVNVGTIGH VDHGKTTLTA AITSVLAAKF GGTAKAYDQI DAAPEEKARG ITINTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI LLARQVGVPY IIVFLNKCDM VDDAELLELV EMEVRELLDK YEFPGDTTPI IHGSAKLAME GDKGPMGEQA IMKLADALDS YIPLPERAID GAFLMPVEDV FSISGRGTVV TGRVERGIIK VGEEIEIVGI HDTQKTTCTG VEMFRKLLDQ GQAGDNVGIL LRGTKREDVQ RGQVLCKPGS IKPHTHFTGE IYVLSKDEGG RHTPFFNNYR PQFYFRTTDV TGAIELPEGK EMVMPGDNVS IIVKLINPIA MEEGLRFAIR EGGKTVGAGV VAKIIA
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