Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3597 |
Symbol | |
ID | 3962589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4008451 |
End bp | 4009059 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637918413 |
Product | NusG antitermination factor |
Protein accession | YP_524832 |
Protein GI | 89902361 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.259347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGACG CTGTAGAAAC CCCGGCAACT GAAACGCCTG CGGCAGCGCA GGTTCTGGCA ACGGCGCCGA CCAATCCCGA TTTGCGTTGG TACGTTGTTC ATGCTTATTC AGGCATGGAA AAAGCGGTTG AGCGCAACAT CACGGAGCGC ATCAATCGCT CTGGTATGCA GCATAAATTT GGCCGCATTC TGGTTCCCAT GGAGGAAGTG GTCGAGATCA AGAATGGTCA GAAAAAAACG ACTGAACGCA AGTTTTTCCC AGGCTATGTG CTGGTTGAAA TGGTGATGGA CGACGATACC TGGCACCTGG TCAAGCACAC CAACAAGGTC ACTGGTTTTG TCGGCGGTCT GAAGACCCGC CCGGCGCCGA TCTCGGAGGC GGAAGTCTTG AAGATCGTCA ACCAGATGCA GGAAGGCACC GAGAAGCCGC GTCACAAAGT TGAATTTGAG GTGGGTGAGT TTGTGCGCGT CAAGGATGGA CCTTTTACCG ATTTCAATGG CTCGGTGGAA GACGTCAACT ACGAAAAGAG CAAAGTTCGC GTCGCGGTTA CAATCTTTGG CCGCGCCACG CCAGTGGAAC TTGATTTTTC TCAGATTGAG AAAACATAA
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Protein sequence | MNDAVETPAT ETPAAAQVLA TAPTNPDLRW YVVHAYSGME KAVERNITER INRSGMQHKF GRILVPMEEV VEIKNGQKKT TERKFFPGYV LVEMVMDDDT WHLVKHTNKV TGFVGGLKTR PAPISEAEVL KIVNQMQEGT EKPRHKVEFE VGEFVRVKDG PFTDFNGSVE DVNYEKSKVR VAVTIFGRAT PVELDFSQIE KT
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