| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3594 |
|---|
| Symbol | rplJ |
|---|
| ID | 3962586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 4006332 |
|---|
| End bp | 4006868 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637918410 |
|---|
| Product | 50S ribosomal protein L10 |
|---|
| Protein accession | YP_524829 |
|---|
| Protein GI | 89902358 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0244] Ribosomal protein L10 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.196569 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTCTTA ATCGCAGTGA GAAAGAAGCG GTCATCAGTG ATGTGACTGG CCTCGCCGCA
AAAGCTCAAA CGCTCGTGAT GGCGGAATAC CGTGGCATCA CGGTCGCTGA CATGACCAAA
TTGCGCTCCA CCGCGCGCAG CAATGGCGTG AGTCTGAGTG TGTTGAAGAA CACCTTGGCT
CGCCGTGCTG TCACGGGTAG CGGATTTGAA ATTGTGTCCG ACCTGATGAC CGGTCCGCTG
ATCTATGGCT TCTCTGAAGA TGCAGTGGCT GCCGCGCGAG TGGTGGCTGA CTTCGCGAAG
ACCAACGTCA AGTTGGTGAT TCGTGGGGGC GCATACGGCG GAAAAGCACT GGACGTGAAC
GGCGTAAAGC AACTGGCAAG CATTCCCTCC AAGGAAGTGT TGTTGGCACA GTTGCTGGGC
TTGATGCAGT CTCCAATTTC GCGTACAGCA CGTGTGCTGG CAGCGATCGC GGAGAAAAAA
GGCGCTGGTG TGGCAGACGC ACCGGTAGAA GCCGCCGCAG AGGCAGTTGC AGCTTGA
|
|---|
| Protein sequence | MSLNRSEKEA VISDVTGLAA KAQTLVMAEY RGITVADMTK LRSTARSNGV SLSVLKNTLA
RRAVTGSGFE IVSDLMTGPL IYGFSEDAVA AARVVADFAK TNVKLVIRGG AYGGKALDVN
GVKQLASIPS KEVLLAQLLG LMQSPISRTA RVLAAIAEKK GAGVADAPVE AAAEAVAA
|
|---|
| |