| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3588 |
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| Symbol | |
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| ID | 3962580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3992861 |
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| End bp | 3995188 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637918404 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_524823 |
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| Protein GI | 89902352 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0529984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCATG TTGGCCCCAG CATTGAACCT GCTGGTCGAT TCTCCCTGAG GAATTCGCGC
ACGCTGCGCT GGACTGTGGG CGTTGGTCTG GTCGTCATGG TGGTTGTTGG GTTGGTGCTG
CTGTTTCTGC TGACGCAAGC GACGACCAAT CGTGACATGT ACGAGCGCAA TTACGCGCGA
CTTTTCGTTC TGAACGTGGT GGTGGCCAGT CTGTTGCTGA TGGTCATCGT CTGGATCGCC
TACCGATTGG TCAAGCGCTT GCGGCAGGGT AAATTTGGCA GCCGCTTGCT GGTCAAACTG
GCCGCGATTT TTGCGCTGGC GGGGTTTGCC CCGGGCGTTC TGATTTATGT GGTTTCCTAT
CAGTTTGTGT CGCGCTCGAT TGAAAGCTGG TTCGACGTCA AGGTGGAAGG GGCGCTGGAC
GCAGGTCTCA ATCTCGGCCG TGCCACGCTG GAGGCACTGT CCAGTGACCT GGCCAGCAAA
GCCCGTGGTG CCGCCTCACA ACTGGCCAAT ACGCCCGATG TCAGTGCCGC CTTGCCGCTG
GAGCGTGTGC GCGAACAGTT GGGTGAGAGT GATGTGTTGC TGTGGAGCGC TGCCGGACAG
CTGATTGCCG CCGCCGGCCA GTCCCGTTAT CAACTCAATC CGGAGCGACC CAGCCAGCAG
CAGTTTCGCA GCGCGCGTGC TCAAAAGTTC ATCACCTGGA TTGAGGGGCT CGATGATTGG
GTGCCGGGCG TGGTGGTGAA TGCCCGGATC AAGGCCTTGG TTCTGGTGTC GAGCAACAGC
CTGGGTTTGC TGGAACAGCC GCGTTTTCTC CTGGTGTCCC AAACATTGCC TTCCACTTTG
GTAGCCAATG CGCTGGCGGT CACGCAAGCC AACCAAGAGT ATCAGGAACG GGCGCTGGCG
CGTGAGGGGC TGCGTCGCAT GTACATCGGC ACCTTGACGC TGAGTCTGTT TCTGGCCGTA
TTTGGCGCGG TCCTGCTAGC CGTTGTGCTG GGCAATCAGA TTGCACGCCC GCTGCTCTTG
CTGGCCGACG GCGTGAGCCA GGTGGCTGCG GGAGATTTGA CGCCCAAGGC GTCGCTGCAG
GGGCGCGACG AACTCGATGG TTTGACCCGT TCCTTTGCCG ACATGACACA ACAGCTTTCA
GACGCTCGGC AGGCGGTGCA GGCCAGCATG CAGCAGGTGA ACTCCGCGCG CGCCAATTTG
CAAACCATTC TCGACAACCT CACGGCTGGC GTGATCGTGC TCGATGCACA AGGCGTTATT
GTGTCCTCCA ATCCGGGTGC CACACGTATT CTCCGGGTGC CGCTGGCGGC CTACGAGGGT
CAGCGCTTGA GCGACATTGA GGGTCTGCAA ACCTTTGCCG CCAGCGTTCA GGCGCAGTTT
GATTCGTTTC TGGCATCCAA CGACCAACAC AGGTTCGACC ATTGGCAGCA GTCCTTCGAA
CTTGGCAATG GTGTGACCAA CCTGGCCGGA CGGCAGCCCA GCAACGCTCT TGTTTTGGTA
GCGCGTGGCG CCTCGCTGCC GGGGGCCACA CGGCTCCTGG TCTTTGATGA CATCTCTGAA
ATCGTGTCCG CCCAACGGGC CCAGGCGTGG GGTGAAGTGG CCCGCCGATT GGCGCATGAG
ATCAAAAACC CACTGACCCC GATCCAGTTG TCAGCCGAAC GGCTGGAGAT GAAGCTGACC
GGCAAGATCG CGCCACCTGA GCAGGCGCTG CTGACCAAGT CAGTCAAAAC CATCGTTACG
CAGGTGGACG CCATGAAGCG TCTGGTCAAC GAATTCCGCG ACTATGCACG GCTCCCAGCG
GCAGAACTCA GGCCGGTCGA TTTGAATGCG CTGGTGACCG ACGTGTTGCA GCTGTATGCC
AGCGAGACTT CGCCGGTGCC CGTACAGATG GAGCTTGATC CATCCGTTCC AACCATCATG
GGCGATGCAC AGCAGCTGCG TCAAGTGATG CACAACCTGC TGCAGAACGC ACAGGATGCC
TCGGAATCGG CTGGCAACAC CGACGCCGAG CATCCGGTGA TTATCAGAAC CCAGTGGCTT
GAGAACGCCG GCCTGGCTCG CCTGAGCGTG CTTGACTGCG GCACAGGATT TCCAGACAGT
ATTCTTAAAC GCGCGTTTGA GCCCTACGTC ACGACCAAGC CCAAGGGCAC TGGTCTGGGC
CTGGCGGTCG TCAAAAAAAT TGCGGATGAA CATGGTGCCC GCGTGGATAT CGCCAACCGG
GTCGCGGACG GCCAAACGCT GGGTGCGCAA GTGTCGTTAT CATTCGCCAC AGAGAATGTC
GCGCCGGGCG AGCCGGGCGA CTCTTGCATA CCCAAGGAAC GCGCGTAA
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| Protein sequence | MSHVGPSIEP AGRFSLRNSR TLRWTVGVGL VVMVVVGLVL LFLLTQATTN RDMYERNYAR
LFVLNVVVAS LLLMVIVWIA YRLVKRLRQG KFGSRLLVKL AAIFALAGFA PGVLIYVVSY
QFVSRSIESW FDVKVEGALD AGLNLGRATL EALSSDLASK ARGAASQLAN TPDVSAALPL
ERVREQLGES DVLLWSAAGQ LIAAAGQSRY QLNPERPSQQ QFRSARAQKF ITWIEGLDDW
VPGVVVNARI KALVLVSSNS LGLLEQPRFL LVSQTLPSTL VANALAVTQA NQEYQERALA
REGLRRMYIG TLTLSLFLAV FGAVLLAVVL GNQIARPLLL LADGVSQVAA GDLTPKASLQ
GRDELDGLTR SFADMTQQLS DARQAVQASM QQVNSARANL QTILDNLTAG VIVLDAQGVI
VSSNPGATRI LRVPLAAYEG QRLSDIEGLQ TFAASVQAQF DSFLASNDQH RFDHWQQSFE
LGNGVTNLAG RQPSNALVLV ARGASLPGAT RLLVFDDISE IVSAQRAQAW GEVARRLAHE
IKNPLTPIQL SAERLEMKLT GKIAPPEQAL LTKSVKTIVT QVDAMKRLVN EFRDYARLPA
AELRPVDLNA LVTDVLQLYA SETSPVPVQM ELDPSVPTIM GDAQQLRQVM HNLLQNAQDA
SESAGNTDAE HPVIIRTQWL ENAGLARLSV LDCGTGFPDS ILKRAFEPYV TTKPKGTGLG
LAVVKKIADE HGARVDIANR VADGQTLGAQ VSLSFATENV APGEPGDSCI PKERA
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