Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3584 |
Symbol | |
ID | 3962575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3988604 |
End bp | 3989431 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637918399 |
Product | GntR-like |
Protein accession | YP_524819 |
Protein GI | 89902348 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.532256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAGC CACGTCCGAT AATCCGCCGT ATGCCGAAAC AGTCAAAAGC CGACGCCGCC GCCGGGTCAT CGGGGCCAAG CCAGGCCAAA AACGCGTCCG CCATGCCCGG CCTGGGCCTG GAGCCTGTGC GCCATGAACG TTTTGCGGAG CGGGTGTATG ACAGCCTGTT TCATTCGATC ATGACGGGCA AGCTCGCACC GGACACGCGC CTGCCGCCGG AAGTGCAACT GGCGCACTTT TTCCAGGTGT CCAGGCCCGT CGTCAGGCAG GCGCTGGACC GGCTGCGACA AGACAGGCTG GTGGAGCCCA TACGCGGTTC CGGCACTTAT GTACGCGCCT GCGGGACGCT GCCCGACCCC GCGATTCCGG CCAGCCGGTA CGCGACGGAC ATGAGCCACA TCATTCACGG GCTGGAGCTG CGGCTGGTGA TCGAACCTGA ATGTGCGCAT CTGGCGGCGC TGCGCCGCAA GCCGGCCGAC CTCGCCCGGA TGGAGGAAAT GCTGGAAGGC TTCGAAAAGG CCACCGCACG CGGCGACGTG GCCCACCACT TTGATTACGG CTTTCATGAA ACCATTGCCC AGGCCACGGC CAATCCCCGC CTGGTCAAGG TGCTCAAGTC ACTGGAGTAC GACGTCAGCC ACGCGGTCAA CCTGTGGCGC CACATGGCCC AAATGAAGCC GTGGCAACGC ACGCAGGATG CACTCGATGA GCACCGCGCG ATTTTCGAGC TGATCAAGCG CCATGATGCT GACGGTGCGC GCCGCGCCAT GCGCAGCCAT GTCGAGAAAG CGCGCGTGCG TATGCTTGAC GCGGCGACTG ATATCTAG
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Protein sequence | MDKPRPIIRR MPKQSKADAA AGSSGPSQAK NASAMPGLGL EPVRHERFAE RVYDSLFHSI MTGKLAPDTR LPPEVQLAHF FQVSRPVVRQ ALDRLRQDRL VEPIRGSGTY VRACGTLPDP AIPASRYATD MSHIIHGLEL RLVIEPECAH LAALRRKPAD LARMEEMLEG FEKATARGDV AHHFDYGFHE TIAQATANPR LVKVLKSLEY DVSHAVNLWR HMAQMKPWQR TQDALDEHRA IFELIKRHDA DGARRAMRSH VEKARVRMLD AATDI
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