| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3582 |
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| Symbol | |
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| ID | 3962573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3986051 |
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| End bp | 3986818 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637918397 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_524817 |
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| Protein GI | 89902346 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAATA GCAGTTCATC CATTGCCGCC GTGCCCCGCG CCGTACTTTT TGACGCCTAC
GGCACCTTGT TTGATGTGTA CAGCGTGGGC CAGTTGGCGG AGGAATTATT TCCCGGCCAT
GGCCTGGCCC TGAGCGTGCT GTGGCGCGAC AAACAGATTG AATACACCCG GCTCGTGACC
ACCAGCAACC ACGGGGCACA CTACCAGCCA TTTAGCGCCT TGACCCGTGC GGCCCTTGTT
TACGCTATAA AAAAGATATC TACTGGCGCT TATTCGACAG CGGCTACAGG CCAATTTGAT
ATAAATCTGG AGGCGGATTT CAAGGCCCGC CATGGAGAGC AAGTCGAGCG ACTGCTGGCG
CAGTACCAGC ATTTAAGCGC CTTCCCGGAG AACCTGGCGG TGTTGCGCGA GCTCAAAGGC
CGCGGCATCC CGACCGGCAT CCTGAGCAAC GGTGACGCCC CCATGCTGCA CGCTGCGGTG
CAGTCGGCCG GCTTTGCGGG CCTGCTGGAT CACGTCATCA GTGTCGACCC GATCCGTCTC
TACAAAACTG ACCCGCAAGC CTATGCGCTG GGTGAGCAGG CCACCGGATT CAAAGCCGAA
CAAATCGTCT TTGTCAGCAG CAATGCCTGG GATGCGCTGG GCGCCACCTG GTACGGCTAC
CAGACCCTGT GGGTCAACCG CTACCAACTG CCGTTTGAAG AGCTCGGCAC ACAGCCCACG
CGTGTGGGCG GCAGCCTGCG TGCGGTGCTG GAATTTTTTC CCGCGTAA
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| Protein sequence | MTNSSSSIAA VPRAVLFDAY GTLFDVYSVG QLAEELFPGH GLALSVLWRD KQIEYTRLVT
TSNHGAHYQP FSALTRAALV YAIKKISTGA YSTAATGQFD INLEADFKAR HGEQVERLLA
QYQHLSAFPE NLAVLRELKG RGIPTGILSN GDAPMLHAAV QSAGFAGLLD HVISVDPIRL
YKTDPQAYAL GEQATGFKAE QIVFVSSNAW DALGATWYGY QTLWVNRYQL PFEELGTQPT
RVGGSLRAVL EFFPA
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