| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3579 |
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| Symbol | |
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| ID | 3961424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3981305 |
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| End bp | 3982570 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637918394 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_524814 |
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| Protein GI | 89902343 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTTT CTTCACTCGG TTTGTCTCCT GCGTTGTTGC GCGCCATCAG CGACCAGGCC
TGGTCTGCGC CGACGCCGAT CCAGGCGGTG GCCATGGGGC CCGCGCTGCA AGGTCGTGAC
TTGCTGGCAT CGGCGCAAAC CGGCTCGGGC AAGACGGCGG CGTTCGCCTT GCCCCTGTTG
CAACAATTCG AAGCCGCGGT GCCACAGAGC CCGCGGCGAC TGCGCGCCCT GATTCTGGTG
CCCACGCGCG AGCTCAGCAC CCAGGTCGGG GAGGAGATTC GCTTCCTTGG GCAGCACCTG
CCACGCGCGT TGAAGGTGTC CATCGTCTTT GGCGGCGTTT CGATCAATCC GCAGATGCTG
CGCTTGCGCG GCGGTGCCGA CATCGTGGTC GCGACGCCGG GGCGTTTGCT GGATCTGATT
GATCACAATG CGCTCAGCTT AAGCGGTGTT GCCACGCTGG TGCTTGATGA AGCCGACCGT
TTGCTCGATC TGGGCTTTGC CGAAGAGTTG AACCGCATCC TGGCCTTGCT GCCCGTGCAG
CGGCAGAACC TGTTTTTCTC GGCGACTTTT CCGCCCGCGG TGCAGACGCT GGCGCAAGTG
CTGCTGCGGG ACCCGGTGCG CATCGAGGTC GCGCCCGAAC CGCAAACCCA GCCCGATATT
GAGCAGCGCG TGATTGAAGT GGATGCCGCC CAGCGCACTC AGTTGTTGCG CCATCTGATG
GCGCAACACC ACTGGAGCCG GGTGCTGGTG TTTGTCGCCA CCAAACACGC CGCCGAGATG
GTGGCCGACA AGCTGCGCAA GGCCCGCATC AACGCCGAAC CGTTTCACGG CGAATTGAGC
CAGGGCAAGC GCACACAAGT GCTGGCTGAT TTCAAGGCGT CACGCCTGAA GGTGGTGGTG
GCCACCGATG TGGCGGCGCG CGGCCTGGAC ATCGCGCAAC TGCCGGTGGT GGTGAATTTT
GATTTACCGC GCTCGGCGCT GGACTATATC CACCGCATCG GCCGCACCGG CCGCGCGGGC
GAAAAGGGCG TGGCGCTGAG CTTTGTCAGC GCTGCCACCG ATGCCCATTG GCGTTTGATT
GAAAAGCGTC AGGGTTTGAG CCTGCCGCGC GAACAGGTGC CGGGGTTTGA ACCAACGGCG
GTTAGCCCTG CAACTGACAG TGACGCCACC GCCGATCTGC CCGCTACCGG CGGCATCAAG
GGCCAACGCC CGAGCAAAAA AGACAAATTA CGCGCCGCCG CCGCGCGCAT CGCAGCGGAA
AAATAA
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| Protein sequence | MPFSSLGLSP ALLRAISDQA WSAPTPIQAV AMGPALQGRD LLASAQTGSG KTAAFALPLL
QQFEAAVPQS PRRLRALILV PTRELSTQVG EEIRFLGQHL PRALKVSIVF GGVSINPQML
RLRGGADIVV ATPGRLLDLI DHNALSLSGV ATLVLDEADR LLDLGFAEEL NRILALLPVQ
RQNLFFSATF PPAVQTLAQV LLRDPVRIEV APEPQTQPDI EQRVIEVDAA QRTQLLRHLM
AQHHWSRVLV FVATKHAAEM VADKLRKARI NAEPFHGELS QGKRTQVLAD FKASRLKVVV
ATDVAARGLD IAQLPVVVNF DLPRSALDYI HRIGRTGRAG EKGVALSFVS AATDAHWRLI
EKRQGLSLPR EQVPGFEPTA VSPATDSDAT ADLPATGGIK GQRPSKKDKL RAAAARIAAE
K
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