| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3577 |
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| Symbol | |
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| ID | 3961422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3979493 |
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| End bp | 3980914 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637918392 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_524812 |
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| Protein GI | 89902341 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACAA CCCAAACCCA GGCAGCCACT GCCACCCCTT CTTCTTCCAA CAAGCGCTTC
GAATCCCTGG CCCTGAACCC GGCCACACTG GCCAACCTGC AGCAACTTGG CTACCTGGAG
ATGACGCCGA TTCAGGCCGC CAGCCTGCCC GCCGCACTGG CGGGCAAGGA CCTGATTGCG
CAAGCCGAAA CCGGCAGCGG CAAGACGGCG GCCTTTGCCC TGGCGCTGCT GGAGCGCCTG
AACCCGCGCC GCTTTGCGGT GCAGGCGCTG GTGCTGTGCC CCACGCGCGA GCTGGCGGAC
CAGGTCACGA TCGAGATTCG CCGCCTGGCG CGTGCGACCG ACAACATCAA AGTCGTCACC
CTGTGCGGCG GCGTGGCCTT GCGCGGCCAG CGCGCTTCTC TGGAGCAGGG CGCGCACATT
GTGGTGGGTA CGCCCGGGCG CGTGATGGAC CACCTGGCGC GCGAGTATTT GAACCTGGAA
GCGCTCAACA CGCTGGTGCT CGACGAGGCC GACCGCATGC TCGACATGGG GTTTTTTGAC
GACATGGCCA CCGTTGCCAA ACAGTGCCCG AAAGAGCGGC AAACGCTGCT GTTTTCGGCC
ACCTACCCGG AAGGCATCGA GAAACTGGCC CAACAATTCA TGCGCGAGCC GCTGAGAGTC
CAGGTGGCCG CGCAGCAAAC CGAAAGCCTG ATCGAGCAAC GCTTTTATGA GGTCACGCGG
GCCAACCGGT TCGAAGCGGT GGCGTTGCTG CTGAACCACT TTCGACCCAT CAGCACGCTG
GCGTTCTGCA ACACCAAGCA GCAGTGCAAA GACCTGGTGA CTTACCTGCA AGCGCAGGGC
TTCAGCGCGC TGGCGTTGTA TGGCGAGCTG GAGCAGCGCG AGCGCGACCA GGTGCTGGCC
CAATTTTCCA ATCGCAGCGC CTCGGTGCTG GTGGCCACTG ATGTGGCCTC GCGCGGCCTG
GACATCACGC AACTCGAAGC CGTGATCAAT GTGGACATCA CACCTGACCC CGAAGTGCAT
GTGCACCGCA TTGGCCGCAC CGGGCGCGCC GGTGAGTCGG GCCTGGCATT AAGCCTGGCC
AGCATGAATG AAATGGGCTC GGTCGGCAAG ATCGAGCAGT ATCAAAAGCG TGAATCGGTT
TGGCACAAGC TCGATGAACT CAAACCTACC GGCCAGGGGC CGCTGCTGCC ACCGATGGTG
ACCTTGCAGA TTCTGGGTGG CCGCAAGGAA AAAATTCGTC CCGGCGACGT GCTGGGCGCA
CTGACCGCCG ATGCGGGCTA CAGCCGCGAG CAGATCGGCA AGATCGTTGT CACCGAATTC
ACCACCTTTG TGGCGGTGCA GCGTGACATT GCGCTGGCGG CGATGCAGAA GCTCAACGCG
GGCAAGGTCA AGGGCAAAAG CGTGAAAGTA CGGCTTTTGT AA
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| Protein sequence | MSTTQTQAAT ATPSSSNKRF ESLALNPATL ANLQQLGYLE MTPIQAASLP AALAGKDLIA
QAETGSGKTA AFALALLERL NPRRFAVQAL VLCPTRELAD QVTIEIRRLA RATDNIKVVT
LCGGVALRGQ RASLEQGAHI VVGTPGRVMD HLAREYLNLE ALNTLVLDEA DRMLDMGFFD
DMATVAKQCP KERQTLLFSA TYPEGIEKLA QQFMREPLRV QVAAQQTESL IEQRFYEVTR
ANRFEAVALL LNHFRPISTL AFCNTKQQCK DLVTYLQAQG FSALALYGEL EQRERDQVLA
QFSNRSASVL VATDVASRGL DITQLEAVIN VDITPDPEVH VHRIGRTGRA GESGLALSLA
SMNEMGSVGK IEQYQKRESV WHKLDELKPT GQGPLLPPMV TLQILGGRKE KIRPGDVLGA
LTADAGYSRE QIGKIVVTEF TTFVAVQRDI ALAAMQKLNA GKVKGKSVKV RLL
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