| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3554 |
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| Symbol | |
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| ID | 3961146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3954053 |
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| End bp | 3955288 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637918369 |
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| Product | 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) |
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| Protein accession | YP_524789 |
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| Protein GI | 89902318 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0921462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAAAC GCGAAACCCT TCATCTGCAT GTGCCGGAGC CCACCGGGCG ACCTGGCCAT
GACACCGATT TTTCTTATCT TCCCCTCTCA GCTGCCGGTT CCAAACGCCG CCCCCCGGTG
GATGTGGCGG CCGCTCAGAC CAGTGACCTG GCCTTTGCGC TGATCCGCGT GCTCGATGAC
GCGGGCCAGG CGGTGGGACC CTGGGCGCCG CACGTCGATG TGGCGCTGTT GCGCCGGGGT
TTGCGCGCCA TGATGCTCAC GCGCGCCTTC GATGCCCGCA TGCTGATCGC GCAGCGGCAG
AAAAAAATGT CGTTCTACAT GCAGTGCCTG GGTGAAGAAG CCATTGCCAC CGCCCACGCG
CTGGCGCTGG GTGAGGGCGA CATGTGCTTT CCGACCTACC GCCAGCAAGG CCTGTTGCTG
GCGCGCGAAG ACAACGACCT GGTGAGCATG ATCTGCCAGC TCTATTCCAA TGAGCGCGAC
CCGATGAAGG GGCGCCAGCT GCCGGTGATG TATTCGAGCA AGAAGCAGGG CTTCTTCTCA
ATCTCGGGCA ATCTGGCGAC GCAGGTGATC CAGGCGGTGG GCTGGGCCAT GGCCTCGGCC
ATCAAGGGGG ATGACAAGGT GGCCTCGGCC TGGATCGGCG ACGGTGCCAC CGCCGAAGCT
GACTTTCACA CCGGCCTGAC CTTTGCCCAC GTGTACCGCG CGCCGGTCAT TCTCAACGTG
GTCAACAACC AGTGGGCGAT TTCCACCTTT CAGGCCATCG CCGGGGGCGA AGGCACCACC
TTTGCCGCGC GCGGTGTTGG CAGTGGCATT GCCTCGCTGC GCGTTGATGG CAATGATTTT
CTGGCCGCCT ATGCCGCCTC CCAATGGGCG CTGGAGCGTG CGCGCAGCAA TTTCGGCCCG
ACGCTGATTG AGTGGGTGAC CTACCGTGCC GGACCGCACT CCACGTCGGA CGACCCCAGC
AAGTACCGCC CGGCCAACGA CGCGGCACGC TTTCCGCTGG GCGACCCGAT TGCGCGCCTC
AAGCAGCATC TGATCAAACT CGGTGCCTGG TCGGATGCCG AGCACGAAGC GGCGCAAAAA
GAGCTCGAAG CGCAGGTCGC AGTGGCGCAG AAAGAGGCCG AGCGCTACGG CACCCTGGCC
GACGGCCGAC CGCAACGCCT GGAAGCGATG TTTGAAGACG TCTACAAAGA CATGCCCGCG
CATTTGCGCG CGCAGCGCGA AGAGTTGGGA GCTTGA
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| Protein sequence | MPKRETLHLH VPEPTGRPGH DTDFSYLPLS AAGSKRRPPV DVAAAQTSDL AFALIRVLDD
AGQAVGPWAP HVDVALLRRG LRAMMLTRAF DARMLIAQRQ KKMSFYMQCL GEEAIATAHA
LALGEGDMCF PTYRQQGLLL AREDNDLVSM ICQLYSNERD PMKGRQLPVM YSSKKQGFFS
ISGNLATQVI QAVGWAMASA IKGDDKVASA WIGDGATAEA DFHTGLTFAH VYRAPVILNV
VNNQWAISTF QAIAGGEGTT FAARGVGSGI ASLRVDGNDF LAAYAASQWA LERARSNFGP
TLIEWVTYRA GPHSTSDDPS KYRPANDAAR FPLGDPIARL KQHLIKLGAW SDAEHEAAQK
ELEAQVAVAQ KEAERYGTLA DGRPQRLEAM FEDVYKDMPA HLRAQREELG A
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