| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3552 |
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| Symbol | |
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| ID | 3961144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3951713 |
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| End bp | 3953011 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637918367 |
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| Product | dehydrogenase catalytic domain-containing protein |
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| Protein accession | YP_524787 |
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| Protein GI | 89902316 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.502358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATTC AAACAATCAA GATGCCCGAT ATTGGCGAAG GCATTGCCGA AGTCGAGCTG
GTGGTCTGGC ATGTGAAGGT GGGCGACGTG GTCGCCGAGG ACCAGATCCT GGCCGACGTG
ATGACCGACA AAGCCACGGT TGAAATCCCG TCCTCGGTGG CGGGCACCGT GGTGTCGCTC
AACGTCACGG CAGGGCAGGT GGTGGCGGTG GGCACCGAGA TCATCCACAT TGAAGTGCAA
GGTTCGGCTC AGCCCGCCGC CGATGCGGCG GTCGTGCCTG TGACAGCGCC AGCAGCTGCT
GTGGCTGCAC CCGTGGCAGC ACCTGCCCCT GCGGCCAAAA CCCCAACACC AGCGCTGGCA
ACCGTAGCCG CGCCCCAACC TGCGCCGACC GCGACAGCAC CGGTTGCCCG ACCGCGCGGC
GCCTTGTCCA TTGCCGCCCC CGCGGTGCGG CGCCAGGCCT GGGAACTGGG TATTGACCTG
GGCACCATCA CAGGCACCGG CCCGGCCGGC CGCATCACGC AAGACGATCT GGATGCCCAC
GCCAAGCGCG GCGGGCACGC ACCCGAGCGG GCCGGGGCCG ATCAGCGCTA CGCGCAACGC
GACGGCGAAG AGGCCATCCC CGTGATTGGC CTGCGCCGCA AGATCGCGCA AAAAATGCAG
GAGGCGAAAC GCCGCATTCC GCACTTCACC TATGTCGAAG AAATCGACGT GACCGAACTC
GAAGACCTGC GCGCGCGCTT GAACACCCAG TACGGCGCCA CGCGGGGCCG CCTGACCCTG
CTGCCGTTCT TGATCCGCGC CATGGTGCTG GCGGTGCGTG AGCACCCCGA GGTCAACGCC
CGTTATGACG ACGAAGCCGG TGTGGTCACC CGTTATTCGG CCGTGCATCT GGGCATGGCC
ACCCAGACCA GCAACGGTCT GATGGTGCCG GTGATCCGCC ACGCCGAAAC GCTGGACCTG
TGGGCCACAG CAAGCGCCGT GCTGCGCGCC AGCGAAGCCG CCCGCAGCGG CAAGGCCGCG
CGCGAGGATT TGAGCGGCTC CACCATCACC CTGACCAGCC TGGGCGCGCT GGGGGGTATT
GTCAGCACCC CGGTGATCAA CCACCCCGAA GTGGGCATTG TGGGCACCAA CCGCATCGTT
GAGCGGCCCA TGATCAGAGG CGGGCTGGTG GTGGCGCGCA AGATGATGAA CCTGTCGTCA
TCGTTCGACC ACCGGGTGGT GGACGGCATG TATGCGGCTG AATTCATCCA AAGAATGCGC
GGTTACCTGG AATGCCCGGG CACGCTGCTG GTGGCATAG
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| Protein sequence | MSIQTIKMPD IGEGIAEVEL VVWHVKVGDV VAEDQILADV MTDKATVEIP SSVAGTVVSL
NVTAGQVVAV GTEIIHIEVQ GSAQPAADAA VVPVTAPAAA VAAPVAAPAP AAKTPTPALA
TVAAPQPAPT ATAPVARPRG ALSIAAPAVR RQAWELGIDL GTITGTGPAG RITQDDLDAH
AKRGGHAPER AGADQRYAQR DGEEAIPVIG LRRKIAQKMQ EAKRRIPHFT YVEEIDVTEL
EDLRARLNTQ YGATRGRLTL LPFLIRAMVL AVREHPEVNA RYDDEAGVVT RYSAVHLGMA
TQTSNGLMVP VIRHAETLDL WATASAVLRA SEAARSGKAA REDLSGSTIT LTSLGALGGI
VSTPVINHPE VGIVGTNRIV ERPMIRGGLV VARKMMNLSS SFDHRVVDGM YAAEFIQRMR
GYLECPGTLL VA
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