| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3546 |
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| Symbol | |
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| ID | 3961138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3943374 |
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| End bp | 3944222 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637918362 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_524782 |
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| Protein GI | 89902311 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.536601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAGTA CTGCCGATAT TCTCAATGCC CGTATCCTGA TCGTGGACGA CCAGGAGGCC
AACGTGCAGT TGCTGGAGCA AATGCTGCGA GGCGCGGGTT ATCAGCGCCT GACGTCGACC
ATGGATCCGT TTGCGGTCTG TGATTTGCAT CGCGCCAACC ACTACGACCT GATTCTGCTC
GATCTGCAGA TGCCGGGCAT GGACGGTTTT CAGGTCATGG AAGGCCTGAA GGAAATTGAC
CCCGATGGTT ATGTGCCGAT TCTTGTGGTC ACGGCGCAGC CGGGTCACAA GCTGCGGGCG
CTGGCCTCGG GCGCGAAGGA TTTTGTGGCC AAACCGTTTG ATCTGGTCGA AGTCAAGACA
CGGATTCACA ACATGCTGGA AGTGCGCTTG TTGTACAAAA AACTCCAGAA TTACAGCCAG
GTGCTGGAGC AAACGGTGGC GGAGCGGACC GCTGAATTGA CTGAAAGTGA AGCCCGCTTT
CGCCGCCTGA CGGAACTGGC ATCGGACTGG TACTGGGAGC AGGACGCGCA GGGGCAATTC
ACCAAGGTGT ATGGCCCGGT GCTGGACATG CTGGGCATAT CGATGGAAAG CCTGCTGGGA
GAAATCAAAC AGGAGCAGGC GTTGCGCTGG AATGAGGCGG AGCGCGCGGT TCTCAAGGCG
AATGTGGCGG CGCGCCGGCC GTTTCTCGAT TTTGTCTTCA GCCGGATCGA TGACGCGGGC
GAGCGCCAGT ACTTTCAGGT CAGCGGGGAG CCGATGTTTG ATGCGTCGGG CCGCTTCACC
GGCTATCGCG GTGTCGGCCG GGACGTCAGC GCGATCATGC GCGAGGTGGC GCAGCCGCGG
GCGGCGTAA
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| Protein sequence | MVSTADILNA RILIVDDQEA NVQLLEQMLR GAGYQRLTST MDPFAVCDLH RANHYDLILL
DLQMPGMDGF QVMEGLKEID PDGYVPILVV TAQPGHKLRA LASGAKDFVA KPFDLVEVKT
RIHNMLEVRL LYKKLQNYSQ VLEQTVAERT AELTESEARF RRLTELASDW YWEQDAQGQF
TKVYGPVLDM LGISMESLLG EIKQEQALRW NEAERAVLKA NVAARRPFLD FVFSRIDDAG
ERQYFQVSGE PMFDASGRFT GYRGVGRDVS AIMREVAQPR AA
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