| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3545 |
|---|
| Symbol | |
|---|
| ID | 3961137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 3942094 |
|---|
| End bp | 3943365 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637918361 |
|---|
| Product | PGAP1-like |
|---|
| Protein accession | YP_524781 |
|---|
| Protein GI | 89902310 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGC CGCCGTCCCC CAAACCCCCT AAACACCTGC ACAGCTCGGA CCTGCGGGGT
GTGGCGCAAT TGGCGACACA GGCCACGGCC AGCGTCGCCC GCATCGCCGA AGGGGTACAC
CAATCGGTCT GGAGCAGCCT GGGCGTCCCC GGTGGCAAGG CGCCTGGGCA AACCCGCGGC
ATCACCGGCC TGGTCTACAA GAGTGTGCAC GGTGTGACCC GGTTGCTCGG CAAAGGCGTG
GACACCTTGT TGGCCCGGTT GCAGCCTGCG CTGGACGCAG CACAAACTGC CCCAGCCGGT
AGCCCCCAGC GCGCGGCGGT GCTGGCGGCA CTCAATGGTG TGATGGGGGA TCACCTGCTT
GAAAGCCACA ACCCGCTCGC TACTCCCATG ACCCTGCACT ACCAGGGCGA GACGCTGAAC
TGGCAGGCCC TGCCTCCCAT GCCGCACGCC ACGGGCAAGG TCCTGCTGCT GATTCACGGG
CTCTGCATGA ACGACTTGCA ATGGCACACG CAACAGAACG GGCAGGTGGT GGACCATGGC
GAGACGCTGG CCGCCACGTT GGGCTACACC CCGGTTTATC TGCGCTACAA CACCGGTCTG
CACACCTCGC AAAACGGACA TGACTTGTCA AACCAGCTGG AGCAACTGCT GACGCATTGG
CCGACACCGA TCAAGGAAAT CACCGTGCTG GCCCACAGCA TGGGCGGCTT GCTGATCCGC
AGTGCGTTCT ACTACGCCAG GCAGGATGGT TTGCGTTGGC CCGGTCGTCT GAAAAACATC
GTGTTTCTGG GTACGCCGCA CCATGGCGCG CCGCTGGAGC GGGCCGGCAA CTGGGTGGAT
GTGGTCCTGG CCAGCACACC CTACAGCGCG CCTTTGGCCA AGCTGGGCCA GTTGCGCAGC
GCTGGCATCA CCGATCTGCG CTACGGCTTT GTGCTCGACC GTGACTGGCA GGGGCACGAC
CGCTTTCAAC GCAAGCCCGA TGCCCGCCAG CCGCTCCCGC TGCCGGCCGG TGTGGCCTGC
TACGCGGTGG CCGCCACCAC GGCCGCCCGG CGCAGCACCC TGGCAGATCG CCTGATTGGC
GATGGCCTGG TGCCCCTGCA CAGTGCGCTG GGGCAGCACG ATGAGCCGCA AAGAAACCTG
GTGTTTGCCA AAACGTCGCA GTGGATTGCC TACCGTACCA GCCACTTGGG CTTGTTGAGC
AGCCCCGAGG TCACTCAAAA AATAGTGCAG TGGCTGACGC CAGCGTCGGC GCCAGGCCAA
GGCAGCAACT AG
|
|---|
| Protein sequence | MAKPPSPKPP KHLHSSDLRG VAQLATQATA SVARIAEGVH QSVWSSLGVP GGKAPGQTRG
ITGLVYKSVH GVTRLLGKGV DTLLARLQPA LDAAQTAPAG SPQRAAVLAA LNGVMGDHLL
ESHNPLATPM TLHYQGETLN WQALPPMPHA TGKVLLLIHG LCMNDLQWHT QQNGQVVDHG
ETLAATLGYT PVYLRYNTGL HTSQNGHDLS NQLEQLLTHW PTPIKEITVL AHSMGGLLIR
SAFYYARQDG LRWPGRLKNI VFLGTPHHGA PLERAGNWVD VVLASTPYSA PLAKLGQLRS
AGITDLRYGF VLDRDWQGHD RFQRKPDARQ PLPLPAGVAC YAVAATTAAR RSTLADRLIG
DGLVPLHSAL GQHDEPQRNL VFAKTSQWIA YRTSHLGLLS SPEVTQKIVQ WLTPASAPGQ
GSN
|
|---|
| |