| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3538 |
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| Symbol | |
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| ID | 3960405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3933835 |
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| End bp | 3935148 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637918354 |
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| Product | hypothetical protein |
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| Protein accession | YP_524774 |
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| Protein GI | 89902303 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000073392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTC GTAACGTTGT TCTGGCAGGC CTGCTGGCTG CGATCGGGGT TGGCGCCTAC
GCGCAGGCCA AGGAGCAGTT CTTCCCGCTG CTGTCCTACC GCACGGGTGC TTACGCGCCC
AACGGCACGC CCTGGGCCAA CGGCAAACAG GACTATCTCA AGATGGTCAT TGCACGTGAT
GGCGGCATCA ATGGTGTCAA GCTGACCTAC GAAGAATGCG AAACCGGCTA CGCGACCGAC
CGTGGCGTTG AGTGCTACGA GCGCCTGAAG AGCCGACCCG GTGTGGCGTT GTTTGACCCG
CAGAGTACCG GCATTACCTT TGCCCTGACC GAAAAGGCAC CGGTGGACAA AGTTCCCTTG
GTGACCCTCG GCTACGGCCT GGCCGTCTCG CAAGATGGCA TGGCGTTCAA GTGGAATTTT
CCCTTGCAGG GCAGCTACTG GACGGGTGCC GACATCCTGA TTCAGCACAT TGGCAAGAGC
CTGGGTGGCC TCGACAAGCT CAAGGGCAAG AAGATCACAC TCGTGTACCA CGACAGTCCA
TTTGGCAAGG AGCCGATTCC GCTGCTGCAA GAGCGCGCGA AGATGCACGG CTTTGAGCTG
CAGTTGTTGC CTGTCACCGC ACCGGGCGTG GATCAAAAGG CCACCTGGCT TCAGGTTCGT
CAAAGCAAAC CTGACTATGT GCTGCTGTGG GGCTGGGGCG TGATGAACTC CACTTCGTTG
AAAGAAGCGC AGGCCACCGG CTACCCGCGT GACAAGATGT ACGGCGTGTG GTGGGCCGGT
GCCGAGCCGG ACGTGAAGGA CGTGGGCGAA GGTGCCAAGG GCTATCACGC ACTGGCGCTC
AACACCTCGG GTCAACAGCC CAAAGTCATG CAGGACATCC TGAAATATGT GCATGCCAAA
GGTCAAGGCA CGGGGCCTAA AGACGAAGTC GGCCAAGTGC TGTATACGCG CGGCGTGATC
ATCCAGATGC TGAGCATTGA AGCCGTACGC AAGGCTCAGG AGCGCTTTGG CAAGGGCAAG
GTCATGACCG GCGAACAGGT GCGCTGGGGC CTGGAAAACC TGGCGCTGGA CCAGAAGAAG
CTTGATGCGT TGGGCTTTGC CGGCGTGATG CGCCCGCTCA GCACTTCATG CGCTGACCAC
ATGGGCTCGA CCGCGGCGCG TATCGAGACC TGGGACGGAA AGAAATGGGA CATCAGCTCG
GATTATCTCG AGGCGGATGA GCAGATTCTC AAACCCATGA TCAAGGCCGG TGCGGACAAA
TATCTTGCCG ACAAGAAGAT GACCCGGCGC GATGTGAAGG ACTGCCAGTC CTGA
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| Protein sequence | MKIRNVVLAG LLAAIGVGAY AQAKEQFFPL LSYRTGAYAP NGTPWANGKQ DYLKMVIARD
GGINGVKLTY EECETGYATD RGVECYERLK SRPGVALFDP QSTGITFALT EKAPVDKVPL
VTLGYGLAVS QDGMAFKWNF PLQGSYWTGA DILIQHIGKS LGGLDKLKGK KITLVYHDSP
FGKEPIPLLQ ERAKMHGFEL QLLPVTAPGV DQKATWLQVR QSKPDYVLLW GWGVMNSTSL
KEAQATGYPR DKMYGVWWAG AEPDVKDVGE GAKGYHALAL NTSGQQPKVM QDILKYVHAK
GQGTGPKDEV GQVLYTRGVI IQMLSIEAVR KAQERFGKGK VMTGEQVRWG LENLALDQKK
LDALGFAGVM RPLSTSCADH MGSTAARIET WDGKKWDISS DYLEADEQIL KPMIKAGADK
YLADKKMTRR DVKDCQS
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