| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3517 |
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| Symbol | |
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| ID | 3963367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3911525 |
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| End bp | 3913924 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637918333 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_524753 |
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| Protein GI | 89902282 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAGAT TTCAAGTCAA AAAAGTAGCC GTGCTGGGTG CCGGCGTGAT GGGTGCGCAA
ATTGCCGCCC ATCTGGTCAA CTGCAAGGTG CCGGTCGTGC TGTTTGACCT GCCCGCCAAA
GAAGGCCCCA AGAACGGCAT CGTCACGCGC GCCATTGAGG GCCTGAAAAA GCTCAAGCCC
GCGCCACTGG GCGTGGTGGA AGATGCTGCC TTGATCCAGC AGGCCAATTA CGAAGAGCAC
ATGGACCAGC TCTTGGACTG CGATCTGGTG ATTGAAGCCA TCGCCGAGCG CATGGACTGG
AAGCTCGATC TGTACAAGAA AATTGCCCCT TTCCTGGCGC CGCACGCCAT CGTGGCGTCC
AACACCTCGG GCCTGTCGAT CACCAAGCTC AGTGAAGTCC TGCCGGAAGA AATCAAGCCA
CGCTTTTGCG GCATCCACTT CTTCAACCCG CCGCGCTACA TGATGCTGGT GGAGTTGATC
AACACACCCA CCACGCAACC GCAGATCCTG GACGACCTCG AAGCCTTTGT CACCAGCAAC
CTGGGCAAAG GTGTGGTGCG GGCCAAGGAT TCCCCCAATT TCATCGCCAA CCGCGTGGGT
GTCGCCGGTA TGTTGTTGAC CATGAAAGAG GTCGAGAATT TTGGCCTGAG CTATGACGTG
GTCGATGACC TGACCGGCAA AAAGCTGGGC CGCGCCAGTT CCGGTACCTT CCGCACCGCT
GACGTGGTGG GGCTGGACAC CATGACACAC GTGATCAAGA CCTTGCAAGA CACCTTGACG
CTTGACACCG ATCCGTTCTA TGAAAGTTTT GCCACCCCCG CGGTGCTCAA GACCTTGCTG
GAAATGGGCA ACCTGGGTCA AAAAACCAAG GCCGGCTTCT TCAAGAAAGT TGGCCGCGAT
GTGCTGCGTT TTGACGGCGA ATCCAAAGAG TACGTGCCCG GTGGCCAGAA GGCAGACCAG
GTCTATGCGC GCATGCTGAA AAAACCGGCC GCCGAACGGC TGAAATTGCT GCGTGACAGC
GAAGGCGCGC AGGGCCAGTT CTTGTGGGCC ATTTTGCGCA ATGCCTTTCA CTACGCTGCG
GTGCACCTGG AAGCCATTGC TGACAATGCG CGCGACGTGG ACTTCTGCAT GCGCTGGGGC
TTTGGCATGA AGCAGGGCCC GTTCGAGTTG TGGCAAGAAG CCGGTTGGCT CAACGTGGCC
AACATGATCA AAGAGGATAT CGACGCAGGC AAAGCCTTGT GCAAAGCGCC ACTGCCGGCT
TGGGTCTTCA AAGGCCCGGT GCTTGAGGCC GGTGGCGTGC ACACACCGCA GGGTTCGTGG
AACCCCAGCA CGGGCCAATT TGTATTGCCG CGCAGCCTGC CGGTGTACAC GCGCCAGCAC
TTCCCCGAGA GCGTGCTGGG TGCCGATGCG CCCAAGGCCC AAACCGCGGG CAAGACACTG
TTTGAAGACG ATGCGATTCG CCTGTGGACG CTGGCCGACG ACGTGGTGAT TGCCAGCATC
AAGACCAAGA TGCACGCCAT TGGCCCGGCC GTGGTTGAAG GTCTGCTCAA GGGTGTGGAA
CTGGCCGAGG CCAGCTACCA GGGGCTTGTC ATCTGGTCGA ACGACGAGCT GTTTTCAGCC
GGTGCCGATT TGCAGGCCAT GCTGCCCGCC TTCATGATGG GCGGTGCCAA GGCGATCGAT
GGGGCTGAGC TGGAAATGCA AGAGGCCATG CTCAAGCTGC GCTATGCCAA CGTGCCCGTG
GTGTCGGCGG TGCGCGGCCT GGCGCTCGGT GGCGGCTGCG AACTGGCAGT GTTTTCCGCC
AAACGCGTGC TTGCCATGGA AAGCTATGTC GGTCTGGTCG AAGTGGGTGT CGGCCTGGTG
CCCGGTGGCG GTGGGCTGAC CTATATCGCC CGTCGCGCGG CTGAGAAAGC CGCCGCGTCT
ACCGGTAAAG ACCTGCTGCC ATTCCTGACC GAGGGCTTCA CCGCTGCGGC CATGGCCAAG
GTGGGAACCA GTGCACTGGA GTCGCGCAAG CTCGGTTATG TGCTTGAGGG CGATGTGATC
GTTCCGCACA AGGACGAGTT GCTGTTTGTG GCCATCAACG AGGCCAAGGC GATGTTCAAC
TCGGGCTACC GGGCGCCGCA AAAGCGCCTG TTCGCGGTGG CAGGGCGCAG CGGCGTGGCC
ACCATCAAGG GCTCGCTGGT CAATATGCGC GACGGCGGCT TCATCAGCGC GCACGACTAC
CACATTGCCA GCCTGATTGC CAACGTGGTG TGTGGTGGTG ACGTGGATGC CGGCAGCCTG
GTCAGCGAAG AGTATCTGAT GACGCTGGAG CGCCAGGCCT TCTGCTCCTT GCTCACGCAC
CCCAAGACGC AGGAACGCAT CATGGGCATG CTCTCCACCG GCAAGCCCGT GCGCAACTAA
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| Protein sequence | MSRFQVKKVA VLGAGVMGAQ IAAHLVNCKV PVVLFDLPAK EGPKNGIVTR AIEGLKKLKP
APLGVVEDAA LIQQANYEEH MDQLLDCDLV IEAIAERMDW KLDLYKKIAP FLAPHAIVAS
NTSGLSITKL SEVLPEEIKP RFCGIHFFNP PRYMMLVELI NTPTTQPQIL DDLEAFVTSN
LGKGVVRAKD SPNFIANRVG VAGMLLTMKE VENFGLSYDV VDDLTGKKLG RASSGTFRTA
DVVGLDTMTH VIKTLQDTLT LDTDPFYESF ATPAVLKTLL EMGNLGQKTK AGFFKKVGRD
VLRFDGESKE YVPGGQKADQ VYARMLKKPA AERLKLLRDS EGAQGQFLWA ILRNAFHYAA
VHLEAIADNA RDVDFCMRWG FGMKQGPFEL WQEAGWLNVA NMIKEDIDAG KALCKAPLPA
WVFKGPVLEA GGVHTPQGSW NPSTGQFVLP RSLPVYTRQH FPESVLGADA PKAQTAGKTL
FEDDAIRLWT LADDVVIASI KTKMHAIGPA VVEGLLKGVE LAEASYQGLV IWSNDELFSA
GADLQAMLPA FMMGGAKAID GAELEMQEAM LKLRYANVPV VSAVRGLALG GGCELAVFSA
KRVLAMESYV GLVEVGVGLV PGGGGLTYIA RRAAEKAAAS TGKDLLPFLT EGFTAAAMAK
VGTSALESRK LGYVLEGDVI VPHKDELLFV AINEAKAMFN SGYRAPQKRL FAVAGRSGVA
TIKGSLVNMR DGGFISAHDY HIASLIANVV CGGDVDAGSL VSEEYLMTLE RQAFCSLLTH
PKTQERIMGM LSTGKPVRN
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