Gene Rfer_3514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3514 
Symbol 
ID3963364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3907083 
End bp3908273 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content70% 
IMG OID637918330 
ProductBNR repeat-containing protein 
Protein accessionYP_524750 
Protein GI89902279 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton 
COG ID[COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCTAA CCCATGCCCC ACTTCGCCTC TTGCGTTTGA TTTTCCTGTC CATCGTACCT 
TCCATTCGTG CAGCCCTGGT GGCGTTGATG GCCGGCCTCG TCGCGGCTGC CTGTGGCGGG
GGTGCCGAGG TGCTGCGCCC GGTCTACGAC GTGCCGGTTC CCGCGCGGCT CACGGGCGTC
CCGGTCTTCG ATCGCGTTGG CCAGGGCGAC GGCCACAGTT GCATGCTCAC GCCGGCGGGC
CAGGCTTGGT GCTGGGGCCT CAACGACGCC GGGCAGCTGG CTTCTGCGTC GCGTGCAGCC
TGCGGCGACG ACGACATGTT CCCCTGTTCT TCTGTCCCCC TTGCAGCGGG CGGCACACCG
GCTTTCGCTT CTATCGACGG CGGCCGCTTC ACGACTTGCG CGCTGGCCGT GGACGGGCGC
GCTTGGTGCT GGGGTGGGGT CAACGACTTG GCACCGCAAC CCTTACCGAC GCCGGTGGGC
GCAAGCACCG ACCGCTTCGT GCAGATCGAC GTGGGTACTT TCGGCGGCGA TGCCTGTGGC
GTCAAGGCCG ACGGCAGCGC GTGGTGCTGG AGTGCGAGGT CGCCGTCCAC GCTGCGCCAA
GTGGCGCCGG GGCTCGCGCT CAAGCAGATC GCGCTGGGCG ATCTGCATGC CTGTGCGCTC
GATGCCGCAG GCCGCGCGTG GTGCTGGCTG ACGGTGTCGT ACCCGGTGCT CGGCAGCGCC
TTCTCCGGCA GTGCAACGAC CCCGGTGGCG GTCGGCGGTG ACCGCGTGTT CGAAGGGATC
GGCGTCGGCG CGATGCATGC CTGCGCGCGC GAGGTGGACG GCACGGCATG GTGTTGGGGT
AGCGGATCGG TGCTCGGCGT CGGCGACCCC AATGCCTTCA GCGCCACGCC GCAGGCGGTG
TCGGGGCCGA AATTCGTGCA GCTGAGCTCG GGCACCTCGC ATGCCTGCGG CGTCGCGGCG
GACGGCAGCG CTTGGTGCTG GGGCGAGAAC CTTGGGGGCC AGCTCGGCGA CGGCACCACC
ACCGCCAGGG CGGCGCCGGT GCGCGTCAGC GGCGGACTGG TGTTTCGCGC GCTTGACGCG
GGTGGTGCGG CCACCTGCGG TATCACCACC GATGGCTCGG CATGGTGCTG GGGCTGGAAT
TACTCGGGGG CGGTCGGCCA GCCAGTGGTC GTGCGCTTGG TGCCGGCCTG A
 
Protein sequence
MYLTHAPLRL LRLIFLSIVP SIRAALVALM AGLVAAACGG GAEVLRPVYD VPVPARLTGV 
PVFDRVGQGD GHSCMLTPAG QAWCWGLNDA GQLASASRAA CGDDDMFPCS SVPLAAGGTP
AFASIDGGRF TTCALAVDGR AWCWGGVNDL APQPLPTPVG ASTDRFVQID VGTFGGDACG
VKADGSAWCW SARSPSTLRQ VAPGLALKQI ALGDLHACAL DAAGRAWCWL TVSYPVLGSA
FSGSATTPVA VGGDRVFEGI GVGAMHACAR EVDGTAWCWG SGSVLGVGDP NAFSATPQAV
SGPKFVQLSS GTSHACGVAA DGSAWCWGEN LGGQLGDGTT TARAAPVRVS GGLVFRALDA
GGAATCGITT DGSAWCWGWN YSGAVGQPVV VRLVPA