| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3504 |
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| Symbol | |
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| ID | 3963354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3895881 |
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| End bp | 3897059 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637918320 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_524740 |
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| Protein GI | 89902269 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0407454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCA AAGCGACAGT GGTACTGGCT GCACTGACCC TGGCAAGCAC CCTTGCCACG
GCTCAACAGG GCGTCAGCCC GACCGAGATC ACGCTCGGCT CGATCCAGGA TTTATCCGGC
CCACTGGCTG GCTTTGGCAA GCAGGCGCGC CTGGGCATGC TGCTGGCCGT GGACGAGATC
AACGAGCAAG GCGGGGTCAG TGGCCGCAAG CTCAAGCTGC TGGTGGAAGA CTCGGGCTAT
GACCCCAAGA AAGCCGTGCT GGCAGCACAG AAACTGGTAA ATCAGGACAA GATTTTCATG
ATGGTCGGCC ACATTGGCAC GGCGCAGAAC ATGGCGGCCA TGCCGGTCCA GTTCGACAAG
AACGTGATCA ATTTTTTCCC GATCACGGCG GCGCGCGAAA TGTACGAACC TTTCCACAAG
CTGAAGTACT CGTTTGCCGC CACCTACTAT GACCAGATGC GGCGCGCCGT GCCCCAAATG
GTCAAGGACA AAGGTATCAA GAAAGTCTGC ACCATTTACC AGGACGATGA TTTCGGCCTG
GAAGTGCTGC GGGGCGGCGA AGCTGGCCTC AAAACCATCA ACATGGATTT CACCGAAAAG
ACGTCCTTCA AGCGCGGTGC GACCGACTTT TCGTCCCAGG TGGCGAAGAT GAAAGCGGCA
GCTTGTGAGA TGGTGGTGTT GGGCACCATC ATTCGCGAGA CCATCGGCAC CATTGGAGAA
TCCCGCAAGA CCGGCTTCAA CCCCATCTTC CTGGGATCCA GCGCCGCCTA TACCGACCTG
ATCCACAAAC TCGGCGGCAA GGCCATGGAC GGGCTGTATG CAACGATGAC CGTGCAAAAC
CCTTACACGG ATGAGCAGTC GCCACAAATA CGTTTCTGGG CCAACAAGTA CAAAACCAAA
TTCAATGAAG ACCCGAGTGT GTTCTCTGTG TATGGCTACC TCATCATCAA CACCTTTGCC
AACGTGGCGA GCAAGGCTGG CAAAAACCTG AGCACCGACA GCTTCATCAA GGTCATGGAC
ACCTTGACCG TTCCACCCGA TATCTTTGGC AGCACCACCA TCACTTTCTC TCCCACCAAA
CGCCTGGGCA GCGACGCGTC GCGTCTGTCG CAGATTCAGG ACAGCAAGTG GAAAGTGGTT
GGACCCTATA TCACTGATGG CGGGCCGGCC AAGAAATAG
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| Protein sequence | MKIKATVVLA ALTLASTLAT AQQGVSPTEI TLGSIQDLSG PLAGFGKQAR LGMLLAVDEI
NEQGGVSGRK LKLLVEDSGY DPKKAVLAAQ KLVNQDKIFM MVGHIGTAQN MAAMPVQFDK
NVINFFPITA AREMYEPFHK LKYSFAATYY DQMRRAVPQM VKDKGIKKVC TIYQDDDFGL
EVLRGGEAGL KTINMDFTEK TSFKRGATDF SSQVAKMKAA ACEMVVLGTI IRETIGTIGE
SRKTGFNPIF LGSSAAYTDL IHKLGGKAMD GLYATMTVQN PYTDEQSPQI RFWANKYKTK
FNEDPSVFSV YGYLIINTFA NVASKAGKNL STDSFIKVMD TLTVPPDIFG STTITFSPTK
RLGSDASRLS QIQDSKWKVV GPYITDGGPA KK
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