| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3503 |
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| Symbol | |
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| ID | 3963222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3893906 |
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| End bp | 3895762 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637918319 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_524739 |
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| Protein GI | 89902268 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.129901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAC TCTGGGACTT GAGCGGCATT CAGGCCAACC GCGACATCGT GATGCCGGGC
GAAACCATTC CGGCCATGTT CTGGAACGCA GTGAAGCAAC GCGGCCCCAA TGTCTGGCTG
CGCCAGAAGC ACCTGGGGCT GTGGCGCAGC CAAACCTGGA ACCAGACGGC CCAGGCAGTC
AGTGAAATTG CAGGCGGCCT CATGAGCCTG GGTTTTGCCA AGGGCGAGTG CACCTCGATT
CTTGCCAATA CCGTCGTGGA GTGGGTCTGG GCCGATCTGG CGGTTCTGTC CTGCGGCGGC
GTCTCCAACG GCATCTACCC CACCGATGCG GCCTCGCAGG TGCAGTATTT GTGCGCCGAC
TCCCGCACCA CATTTCTATT TGTGGAAGAC GACGAGCAAC TCGACAAGGC GCTTGAAGTG
CGCGACCAGT TGCCGAGCCT GCGCAAAATC GTCGTGTTCG ACATGGAAGG ACTGCGCAAC
CTCGACGATG CCAACATCAT CAGCCTGGAC GACCTGCGTG CACTGGGCCG CGACTACCTG
GCCCAACACC CGAATGAACT GCAACAGCGC GTTGACGCCT GCCAACCCGA CGACCTGGCC
ATCCTGGTCT ACACCTCCGG CACCACCGGC AAACCCAAGG GCGCCATGCA TCTGCACGCC
GGACTGGTCT ACACCGTGCG TGGATTCAAC ACGCTGATCG CGCAGGATGA ACGCGACGAG
CGCATGTGCT TCCTGCCGCT GTGCCACATT GCCGAGCGCA TGGGCGGCGA GTACTTTGCC
TTGTACACAG GCACCAAACT CAACTTTGTG GAACACCCGG AGACCATCCC CGAAAACGTG
CGCGAGATCG CGCCCACGGT CTTTACCGGC GTGCCGCGCG TGTGGGAGAA GTTCTACTCG
GGGGTGATGA TTTCCTTGAA AGAGGCCGGT GCCGTCCAAC AGGCCGCCTA CGCCTGGGGC
ATTGGTGTGG GTACCGCGAT TGCCAACAAG GTGCTGGCCG GTGAGTCGGT GAGCGGCTGG
CTCAAGCTGA AGTTCCAGAT CGCACAGTGG CTGGCCCTGA ACAACGTGCG CAAGCTCATT
GGCATTCACC GTGCCCGCTT TCTGGTCACC GGCGCGGCGC CGATCTCGCC CGATCTGGTG
CGCTGGTACC TGGCCCTGGG CGTGCCCATG CTCGAAGTCT GGGGCATGAC GGAGACCTGC
GGCGCGTCCA CCGGCGTGCC CGCCGAGCGC ATGCGCCCCG GCTCGATCGG GCCGGCCGCC
AGCTTCAATG AAGTCCGGCT CGACCCGGCC ACCGGCGAAA TCCTGGTGCG CGGCAAGAAC
GTCTTTGCCG GTTACCTGAA CCTGCCGGAA AAGACAGCGG AGACCATCGA CCCAGACGGC
TGGCTGCACA CCGGCGATGT GGGCGCGATG GATGCGGATG GCTACTTCCG CATCACCGAC
CGCATGAAGG ACATCATCAT CACGGCCGGC GGCAAGAACG TCACCCCGAG CGAGCTGGAA
AACGACCTGA AGTTCTCGCC CTACATCACC GATGCGGTGG TGATTGGCGA CAAGCGTCCT
TTTCTGACCG TGATCATCAT GATCGATCAG GAAAACGTCG AGAAATACGC GCAGGATGCG
GACGTTCCTT TCAGCAACTA CGCGTCACTG ACCCGCTCAC CCGAGGTGCA GGCGCTGATT
CAAGGCGAGA TCGACCGGGT CAACAAGAAG TTCGCCCGCG TCGAGCAGAT CAAGAAATTC
TTCCTGCTGG AGAACCAGTT GACGGCGGAA GACGAAGAGC TGACACCCAC CATGAAGCTC
AAACGCAAAT TGGTGGAAAA GAAGTATGCA GCCCAGATTG AGGCCATGTA CCGCTGA
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| Protein sequence | MTQLWDLSGI QANRDIVMPG ETIPAMFWNA VKQRGPNVWL RQKHLGLWRS QTWNQTAQAV
SEIAGGLMSL GFAKGECTSI LANTVVEWVW ADLAVLSCGG VSNGIYPTDA ASQVQYLCAD
SRTTFLFVED DEQLDKALEV RDQLPSLRKI VVFDMEGLRN LDDANIISLD DLRALGRDYL
AQHPNELQQR VDACQPDDLA ILVYTSGTTG KPKGAMHLHA GLVYTVRGFN TLIAQDERDE
RMCFLPLCHI AERMGGEYFA LYTGTKLNFV EHPETIPENV REIAPTVFTG VPRVWEKFYS
GVMISLKEAG AVQQAAYAWG IGVGTAIANK VLAGESVSGW LKLKFQIAQW LALNNVRKLI
GIHRARFLVT GAAPISPDLV RWYLALGVPM LEVWGMTETC GASTGVPAER MRPGSIGPAA
SFNEVRLDPA TGEILVRGKN VFAGYLNLPE KTAETIDPDG WLHTGDVGAM DADGYFRITD
RMKDIIITAG GKNVTPSELE NDLKFSPYIT DAVVIGDKRP FLTVIIMIDQ ENVEKYAQDA
DVPFSNYASL TRSPEVQALI QGEIDRVNKK FARVEQIKKF FLLENQLTAE DEELTPTMKL
KRKLVEKKYA AQIEAMYR
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