Gene Rfer_3501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3501 
Symbol 
ID3963220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3892259 
End bp3893107 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content61% 
IMG OID637918317 
ProductABC transporter related 
Protein accessionYP_524737 
Protein GI89902266 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.111605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCTG CCATGAACCC CACCCCTGTC CAGCCTGTGC CTCAACCACT CTTGTCCGCC 
CGGCAACTGA GCGTGCGCTT CGGCGGCGTG CTGGCGGTCA ACAACGTCAG CTTTGATGTC
CAACAGGGTG AGGTTTTCAC CCTGATTGGC CCCAATGGCG CGGGCAAGAC CACCGTTTTC
AACTTGATCA GCCGCATCTA CACCCCAACC AGCGGCGAGA TCGACTACCT GGGGCCACAA
GGTCTCATCC GGCTGACTGA GCAAGCGCCG CAAGATGTGG CCGGCCTGGG CATTGCGCGC
ACGTTTCAGA ACATTGAATT GTTCGAGCAC GCCACCGTGT TGCACAACCT GCTGATCGGT
CGCCATACGC AGCGCAAGAC CGGACTCTGG CAGGACCTGC TTTTCACCCG GACCGCGCGC
GAGGCCGAGC TGAAGGCACG GGAAAAGGCG GAGGAAGTGA TCGAATTTCT CGACCTGCAG
CATCACCGTG ACGCCATGGT GGCCGGTCTG CCGTACGGCG TGCGCAAAGT GGTTGAAGTG
GCCCGGGCCT TGTGCACCGA GCCCAAGCTG CTGCTGCTCG ATGAACCCTC AAGCGGCCTG
AACGTGGAGG AAACCGAGGA CATGGCGTTC TGGATTCAGG ATATCAAAAA CGATCTCGGC
ATCACGGTGC TGATGGTGGA ACACGACATG ACACTGGTCT CCAAGGTGTC CGACCGCGTG
CTGGCCATGA ATCAGGGCGA GGTGCTTGCC ATGGGCACGC CGCGCGAAGT GCAAAGCGAC
CCCGGCGTGA TCGAAGCCTA TCTGGGCTCG GTCGATGACG TGTCTTCCCT GCGCAGGCAA
ACAGCATGA
 
Protein sequence
MNAAMNPTPV QPVPQPLLSA RQLSVRFGGV LAVNNVSFDV QQGEVFTLIG PNGAGKTTVF 
NLISRIYTPT SGEIDYLGPQ GLIRLTEQAP QDVAGLGIAR TFQNIELFEH ATVLHNLLIG
RHTQRKTGLW QDLLFTRTAR EAELKAREKA EEVIEFLDLQ HHRDAMVAGL PYGVRKVVEV
ARALCTEPKL LLLDEPSSGL NVEETEDMAF WIQDIKNDLG ITVLMVEHDM TLVSKVSDRV
LAMNQGEVLA MGTPREVQSD PGVIEAYLGS VDDVSSLRRQ TA