Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3501 |
Symbol | |
ID | 3963220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3892259 |
End bp | 3893107 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637918317 |
Product | ABC transporter related |
Protein accession | YP_524737 |
Protein GI | 89902266 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.111605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATGCTG CCATGAACCC CACCCCTGTC CAGCCTGTGC CTCAACCACT CTTGTCCGCC CGGCAACTGA GCGTGCGCTT CGGCGGCGTG CTGGCGGTCA ACAACGTCAG CTTTGATGTC CAACAGGGTG AGGTTTTCAC CCTGATTGGC CCCAATGGCG CGGGCAAGAC CACCGTTTTC AACTTGATCA GCCGCATCTA CACCCCAACC AGCGGCGAGA TCGACTACCT GGGGCCACAA GGTCTCATCC GGCTGACTGA GCAAGCGCCG CAAGATGTGG CCGGCCTGGG CATTGCGCGC ACGTTTCAGA ACATTGAATT GTTCGAGCAC GCCACCGTGT TGCACAACCT GCTGATCGGT CGCCATACGC AGCGCAAGAC CGGACTCTGG CAGGACCTGC TTTTCACCCG GACCGCGCGC GAGGCCGAGC TGAAGGCACG GGAAAAGGCG GAGGAAGTGA TCGAATTTCT CGACCTGCAG CATCACCGTG ACGCCATGGT GGCCGGTCTG CCGTACGGCG TGCGCAAAGT GGTTGAAGTG GCCCGGGCCT TGTGCACCGA GCCCAAGCTG CTGCTGCTCG ATGAACCCTC AAGCGGCCTG AACGTGGAGG AAACCGAGGA CATGGCGTTC TGGATTCAGG ATATCAAAAA CGATCTCGGC ATCACGGTGC TGATGGTGGA ACACGACATG ACACTGGTCT CCAAGGTGTC CGACCGCGTG CTGGCCATGA ATCAGGGCGA GGTGCTTGCC ATGGGCACGC CGCGCGAAGT GCAAAGCGAC CCCGGCGTGA TCGAAGCCTA TCTGGGCTCG GTCGATGACG TGTCTTCCCT GCGCAGGCAA ACAGCATGA
|
Protein sequence | MNAAMNPTPV QPVPQPLLSA RQLSVRFGGV LAVNNVSFDV QQGEVFTLIG PNGAGKTTVF NLISRIYTPT SGEIDYLGPQ GLIRLTEQAP QDVAGLGIAR TFQNIELFEH ATVLHNLLIG RHTQRKTGLW QDLLFTRTAR EAELKAREKA EEVIEFLDLQ HHRDAMVAGL PYGVRKVVEV ARALCTEPKL LLLDEPSSGL NVEETEDMAF WIQDIKNDLG ITVLMVEHDM TLVSKVSDRV LAMNQGEVLA MGTPREVQSD PGVIEAYLGS VDDVSSLRRQ TA
|
| |