Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3463 |
Symbol | |
ID | 3962571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3854826 |
End bp | 3855701 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637918281 |
Product | heat shock protein HtpX |
Protein accession | YP_524701 |
Protein GI | 89902230 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACGTA TTCTCTTGTT TGTTTTGACC AATGTCGCCG TGGTCGCGGT GCTGGGCATC GTTGCCAGCT TGCTGGGGGT GAACCGTTAC CTGACGGCAA GCGGGCTTGA CCTGGGCTCC TTGCTCGGCT TTGCCTTGGT CATTGGTTTT GGCGGCGCCA TCATTTCGCT GTTGATCAGC AAGCCGATGG CCAAATGGAC CACGGGCGTG CGCATCATCA GCCAGCCGCA AAACGTCGAC GAGGCCTGGA TTGTGGAGAC CGTGCGCAAA TTGGCCGACA CAGCTGGCAT TGGTATGCCG GAAGTGGGTA TTTTTGACGG TGCGCCCAAT GCCTTCGCCA CCGGAGCGTT CAAGAACTCG GCGCTGGTGG CTGTGTCCAC CGGCTTGTTG CAGGGTATGA CGCGTGAAGA GATTGAGGCC GTGATCGGCC ACGAAGTTGC CCACGTTGCC AATGGTGACA TGGTCACCAT GGCCCTGATT CAAGGCGTGA TGAACACCTT TGTGGTGTTC CTGAGCCGCG TGATCGCCTT TGCCATCGAC GGCTTCTTGC GCAAAGGCGA CGAGCGCTCC AGCGGCCCCG GCATTGGCTA CATGATCACC ACCGTCGTGC TTGACATCGT GCTCGGTTTT GCGGCCGCCA TCGTGGTGGC CTGGTTCTCC CGTCACCGTG AATTCCGGGC CGATGCTGGC GCTGCCAAGC TCATGAATCG CAAGCAGCCG ATGATCAACG CGCTGGCGCG GCTCGGTGGC ATGACGCCGG GCGAGTTGCC CAAGAGCATG GCGGCCATGG GCATTGCGGG TGGCATTGGC AAGCTGTTCT CGACCCACCC GCCGATTGAA GAGCGCATCG CGGCTTTGCA AAACGCGCCG CTGTGA
|
Protein sequence | MKRILLFVLT NVAVVAVLGI VASLLGVNRY LTASGLDLGS LLGFALVIGF GGAIISLLIS KPMAKWTTGV RIISQPQNVD EAWIVETVRK LADTAGIGMP EVGIFDGAPN AFATGAFKNS ALVAVSTGLL QGMTREEIEA VIGHEVAHVA NGDMVTMALI QGVMNTFVVF LSRVIAFAID GFLRKGDERS SGPGIGYMIT TVVLDIVLGF AAAIVVAWFS RHREFRADAG AAKLMNRKQP MINALARLGG MTPGELPKSM AAMGIAGGIG KLFSTHPPIE ERIAALQNAP L
|
| |