Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3459 |
Symbol | |
ID | 3962566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3850251 |
End bp | 3850799 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637918277 |
Product | BadM/Rrf2 family transcriptional regulator |
Protein accession | YP_524697 |
Protein GI | 89902226 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACTCA GTACCAAAGG CCGATTTGCC GTCACAGCGA TGATTGACGT GGCGCTACGC GAAAAATTGG GACCGGTTCC CCTGTCCGAC ATTGCGGTGC GGCAGCAGAT TTCGCTCTCG TACCTGGAGC AAATGTTCAG CAAGCTGCGC CAGCACGGTT TGGTGGCCAG CACACGCGGA CCCGGCGGTG GTTACGCGCT GGGGCAGCAG GCTGACCGCA TCACAGTCGC TGACATCATT GGTGCCGTTG AAGACGAGAC CGATCGCAGC ACAAAAGACG CCGTTCGCCA CGCGAAGACC GCCGCAAGCA GCGCGGGCAA GGACATGGCA CAGGACCTGT GGGACAGCTT GAACACCAAA ATGATGGACT ACATGCAGTC GGTCACCTTG CGCAGTCTAG CGCTCGGGCA ACTGGCCAAA GGGGTTCGGA TTGAAGAAGA ACCGGCACCC AACCGGGGGG TGTTCAAGAA GCCCAAACAG GAGTCTGTGC AGCGCAGTGT GCCCAACTCC GTCTTTGCAC TGGGTCAGGC TATGCTGGCC CGGGGTTAA
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Protein sequence | MRLSTKGRFA VTAMIDVALR EKLGPVPLSD IAVRQQISLS YLEQMFSKLR QHGLVASTRG PGGGYALGQQ ADRITVADII GAVEDETDRS TKDAVRHAKT AASSAGKDMA QDLWDSLNTK MMDYMQSVTL RSLALGQLAK GVRIEEEPAP NRGVFKKPKQ ESVQRSVPNS VFALGQAMLA RG
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