Gene Rfer_3459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3459 
Symbol 
ID3962566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3850251 
End bp3850799 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content60% 
IMG OID637918277 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_524697 
Protein GI89902226 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACTCA GTACCAAAGG CCGATTTGCC GTCACAGCGA TGATTGACGT GGCGCTACGC 
GAAAAATTGG GACCGGTTCC CCTGTCCGAC ATTGCGGTGC GGCAGCAGAT TTCGCTCTCG
TACCTGGAGC AAATGTTCAG CAAGCTGCGC CAGCACGGTT TGGTGGCCAG CACACGCGGA
CCCGGCGGTG GTTACGCGCT GGGGCAGCAG GCTGACCGCA TCACAGTCGC TGACATCATT
GGTGCCGTTG AAGACGAGAC CGATCGCAGC ACAAAAGACG CCGTTCGCCA CGCGAAGACC
GCCGCAAGCA GCGCGGGCAA GGACATGGCA CAGGACCTGT GGGACAGCTT GAACACCAAA
ATGATGGACT ACATGCAGTC GGTCACCTTG CGCAGTCTAG CGCTCGGGCA ACTGGCCAAA
GGGGTTCGGA TTGAAGAAGA ACCGGCACCC AACCGGGGGG TGTTCAAGAA GCCCAAACAG
GAGTCTGTGC AGCGCAGTGT GCCCAACTCC GTCTTTGCAC TGGGTCAGGC TATGCTGGCC
CGGGGTTAA
 
Protein sequence
MRLSTKGRFA VTAMIDVALR EKLGPVPLSD IAVRQQISLS YLEQMFSKLR QHGLVASTRG 
PGGGYALGQQ ADRITVADII GAVEDETDRS TKDAVRHAKT AASSAGKDMA QDLWDSLNTK
MMDYMQSVTL RSLALGQLAK GVRIEEEPAP NRGVFKKPKQ ESVQRSVPNS VFALGQAMLA
RG