Gene Rfer_3440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3440 
Symbol 
ID3960500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3829773 
End bp3830954 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content61% 
IMG OID637918260 
ProductPUA 
Protein accessionYP_524680 
Protein GI89902209 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGA TTTCTTTAAG AGCCGGCAAA GAGCGCTCGC TGTTGCGCCG ACATCCCTGG 
ATTTTTGAGT CGGCCATTGC CCATGGCGGG GCCGATGCCG GTGAGACCGT GCGGGTGGAA
TCGCACGAAG GGCAATTCCT GGCCTGGGCC GCGTACAGTC CGGCCTCCAA AATCCGGGCC
CGGGTCTGGA GTTTTGTCGA GACGCAGCGC ATAAACACTA CATTTTTAAT AGCTGCTTGT
GAAAGCGCCA TAAGGGCTAG AGCCAGATTT GCCATAAATA GCGACAGTAT GCGGCTGGTC
CACGGCGAGT CTGATGGTTT GCCGGGGCTG ATCGTGGATC GTTATGGGGA TACGCTGGTG
GCGCAGTTTC TCTCCAGTGG CGCCGAGCGC TGGAAAGACG TGCTGGCTGA CGCCCTGCTG
GCTGCCACCG GTCTGTCCAG ACTGTATGAA CGCTCCGACG CCAGTGGCCG CGTGCGCGAA
GGTTTGCCCG AGGTGAGTGG CTGGCTGCGT GGTGACGGTC CGGTGGAGCT GGTCTTGCGC
GAGCACGGCT GGCAACTGGG TGTCAATATT GCCACTGGGC ACAAAACCGG GTTTTATCTG
GACCAGCGCG ATAGCCGCGC CAGGTTTGCC GACTATTGCG CGCGCCTGAA GTTCGAGCGC
GTGCTCAACT GCTATTGCTA CACCGGCGGC TTCACCGTGG CGGCATTGAC CGGTGGCGCC
GCGCACGTCA CGTCCATTGA CTCCTCCGGC CCGGCCCTGG CGCAGGCTGC CGCCAACCTG
GCCTTGAACG GTTTTGCGCC TGAGCGCGCC ACCTTCCTGG ATGCCGACGT GAATGCCTCG
CTGCGCCAGT TCGGCGCCGA GGGCCAGACT TTTGACGCCA TCGTGCTCGA TCCGCCCAAG
TTTGCGCCCA CGGTAGCGCA TGCTGAACGA GCGGCGCGGG CTTACAAGGA CATCAACCGG
CTGGCGTTCA AACTTCTGGC GCCGGGCGGT GTGCTATTTA CCTATTCCTG TTCGGGCGGC
ATCAGCGCTG AGCTGTTTCA TAAAATTGTG GCCTCAGCCG GCATTGACGC CCAGATCGAC
GGTTACATTG TTGAGCGCAT GGGCGGTGCA CCGGATCACC CGATGACAAT CAATTTCCCC
GAAGGCGAAT ACCTCAAAGG CCTGGTGGTC ATGCGTAAAT AA
 
Protein sequence
MKTISLRAGK ERSLLRRHPW IFESAIAHGG ADAGETVRVE SHEGQFLAWA AYSPASKIRA 
RVWSFVETQR INTTFLIAAC ESAIRARARF AINSDSMRLV HGESDGLPGL IVDRYGDTLV
AQFLSSGAER WKDVLADALL AATGLSRLYE RSDASGRVRE GLPEVSGWLR GDGPVELVLR
EHGWQLGVNI ATGHKTGFYL DQRDSRARFA DYCARLKFER VLNCYCYTGG FTVAALTGGA
AHVTSIDSSG PALAQAAANL ALNGFAPERA TFLDADVNAS LRQFGAEGQT FDAIVLDPPK
FAPTVAHAER AARAYKDINR LAFKLLAPGG VLFTYSCSGG ISAELFHKIV ASAGIDAQID
GYIVERMGGA PDHPMTINFP EGEYLKGLVV MRK