Gene Rfer_3439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3439 
Symbol 
ID3960499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3828653 
End bp3829708 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content57% 
IMG OID637918259 
Productcobalamin synthesis protein, P47K 
Protein accessionYP_524679 
Protein GI89902208 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.745732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTTA TCCCTGCAAC CATCCTGACG GGCTTTCTCG GCTCGGGTAA AACCACGCTG 
CTCAAACGCG TGCTGGAAGA GGCGCACGGC CAGAAAATCG CCGTCATTGA AAACGAGTTT
GGCGAAGAAA ACATCGACAA CGAAATTCTG GTGACCGAGT CCAAGGAACA GATCATCCAG
ATGAACAACG GCTGCATCTG CTGCACCATT CGCGAAGATC TGCGCGAAGC ACTGCAGTTG
CTGGCCGCCA AGAAGCGCCA GGGGCTGCTC GATTTTGACC GCGTGGTGAT CGAGACCACC
GGCCTGGCCG ACCCCGGTCC GGTGGCGCAA ACCTTTTTCA TGGACGACGA AATTGCCGAG
AGCTACCTGC TCGACTCGAT TTTGACGCTG GTCGATGCCA AGCATGCCAT GACGCAGCTC
GACGAGCGCC AGGAGGCGCG CCGCCAAGTG GGTTTTGCCG ATCAGATTTT CATCAGCAAG
ACCGATCTGG TGGCCGCCGA TGAGGTCGAT GCCTTGATGC ACCGCTTGAA GCACATGAAC
CCACGCGCAC CGCAAAAGGC GGTGCATTTT GGCGAGGCGG CCTTAAGCGA GGTATTTGAC
CTGCGCGGCT TCAATCTCAA CGCCAAGCTC GATATCGACC CGGATTTTCT GACGGAAGAA
GCGCATGACC ACGAGGGGCA CGATCACCCT GAGCATGCCC CCGGCGAGCA CTGTGACCAT
CCCTCGCACC AACACGGGGG TCATCACCAC CACCATGAGG ATGACGTCAA GAGTTTCGTC
TTCAAATCCG AGCGCGCTTT TGACCCGGCC AAACTGGAAG ACTTTCTGGG CGCCATCGTC
AATATTTATG GCCCGCGCAT GTTGCGTTAC AAAGGGGTCC TGCTCATGAA GGGCACCGAT
CGAAAAGTGA TTTTTCAGGG TGTGCACCAG TTGATGGGCA GTGACCTGGG GCCGGCCTGG
GCCGCAGGGG AGCCGCGTGT CAGCAAAATG GTGTTCATCG GCATTGACTT GCCGCAAGAC
ATTTTTCTGC AAGGCATGGA ACAGTGCCTG GTTTGA
 
Protein sequence
MSLIPATILT GFLGSGKTTL LKRVLEEAHG QKIAVIENEF GEENIDNEIL VTESKEQIIQ 
MNNGCICCTI REDLREALQL LAAKKRQGLL DFDRVVIETT GLADPGPVAQ TFFMDDEIAE
SYLLDSILTL VDAKHAMTQL DERQEARRQV GFADQIFISK TDLVAADEVD ALMHRLKHMN
PRAPQKAVHF GEAALSEVFD LRGFNLNAKL DIDPDFLTEE AHDHEGHDHP EHAPGEHCDH
PSHQHGGHHH HHEDDVKSFV FKSERAFDPA KLEDFLGAIV NIYGPRMLRY KGVLLMKGTD
RKVIFQGVHQ LMGSDLGPAW AAGEPRVSKM VFIGIDLPQD IFLQGMEQCL V