| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3438 |
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| Symbol | |
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| ID | 3960498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3827332 |
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| End bp | 3828621 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637918258 |
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| Product | TraR/DksA family transcriptional regulator |
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| Protein accession | YP_524678 |
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| Protein GI | 89902207 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1734] DnaK suppressor protein |
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| TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.258531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCCT CGTTTTTTCA ATTGATGGGA TTTCCAGCGC TTAAACCTGT AAACTCGCCC
GCCAAACAAG TGGCGCAAAG CCAGCCCTCA AAAGCTGGCG CCGAGGGGAT AAGCTTAAAA
GCTTCAGGCG GCGCTGCCAA CACCAGGCAA ACATCCACCC GCGATGTCAT CGAGCAGAAA
AAATCAGCGA GGAGACAAGA CGTGAAATCG CAAACCGTGA AAGCCAAGGA GACGCGTAAA
GCGACCCATG CCATCGTCAA GGTCAAGCCG GGCGTCAAAG CGCTCGCCAA GCCGAAACCG
GTGGCGCGGC CTCAAGACAA GCCGGCGGTG AAGCCCGCGC CCGTTGCTAA ATCAGCGCAA
GGCGCCGCGG CCAAACCGCC GGTTGGCAAG AAGGCGCCGG CCAAGCCGTC AGTGCCAACG
AAAGTGGTGG GGAAAGAGTC CAAGTCGGCT CCGGAAACCG TGGTTAAGGT GACCAAGGTG
GCCAAGGCAT CGCCAGCGAA GGTGGCCAAG GCCCCCTCGG TCAAAGTTGT CAAACCGACA
GCAACAATTC AAGCAAAGGA TTCAGTGAAA ACGACGCTCG CGAAAGCCGC TAAACCTGAG
GTGGCAGCAC CCAAACTCCC CGTGGCCCCG GCTGTGACGC CGGTCAAAGT TGCGCTGGCG
CCCGTAGCGT CAGCCGCCCC ATCCGTACCC GTCAGGGCGG GTCGTCCATC TTCGCGGCTG
GCGCAGTTGA CTGTGCCTTC CATGGCGCAG TCGGTGGCTT CAACCGCTGC CAAAGCCAGT
TTTTCACAAA CCATCGTCGC GCCCTACATC GTTCCACCGG TCGCTTCCGC CGTCAAAAAA
GACCCGGCGT TGGCCAACAA CTGGAAACTC AAACCGGTTG AACAATTGAC CGAGGCCGAA
CTGATCGCCA TGCCTGATGA CGAGTACATG AACGATACCC AGCTGGCGTT CTTTCGTCGT
GTGCTCACCG CGCTCAAACA GGATATTCTG AGCAACGCCG GCCAAACCAC TGAGCATCTG
CGGGCCGACA CGGTGGTGGT GCCTGATCCG GCCGATCGGG CCACCATTGA AGAAGAACAC
GCCTTGGAGT TGCGCACCCG GGACCGTGAG CGCAAGCTGC TAAAGAAAAT TGAACAATCG
CTCGCGCGCA TCGACTCGGG CGACTATGGC TATTGTGATG AAACCGGTGA AGCCATCGGG
GTTGGGCGTC TGTTGGCGCG CCCGACCGCC AATCTGTCGC TGGAGGCTCA GCAGCGCCGG
GAACTCAAGC AGAAGATGTT TGGGGATTGA
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| Protein sequence | MFSSFFQLMG FPALKPVNSP AKQVAQSQPS KAGAEGISLK ASGGAANTRQ TSTRDVIEQK
KSARRQDVKS QTVKAKETRK ATHAIVKVKP GVKALAKPKP VARPQDKPAV KPAPVAKSAQ
GAAAKPPVGK KAPAKPSVPT KVVGKESKSA PETVVKVTKV AKASPAKVAK APSVKVVKPT
ATIQAKDSVK TTLAKAAKPE VAAPKLPVAP AVTPVKVALA PVASAAPSVP VRAGRPSSRL
AQLTVPSMAQ SVASTAAKAS FSQTIVAPYI VPPVASAVKK DPALANNWKL KPVEQLTEAE
LIAMPDDEYM NDTQLAFFRR VLTALKQDIL SNAGQTTEHL RADTVVVPDP ADRATIEEEH
ALELRTRDRE RKLLKKIEQS LARIDSGDYG YCDETGEAIG VGRLLARPTA NLSLEAQQRR
ELKQKMFGD
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