| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3435 |
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| Symbol | hslU |
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| ID | 3960495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3823597 |
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| End bp | 3824919 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637918255 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_524675 |
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| Protein GI | 89902204 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.341548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCGC AAGAAATCGT TTTTGAACTT GATAAACACA TTGTTGGTCA GCAACAGGCC
AAGCGGGCGG TGGCCATTGC ACTGCGCAAT CGCTGGCGGC GCCAGCAGGT CGAGCCCGGC
CTGCGTGCAG AAATTACACC CAAGAACATT TTGATGATTG GCCCGACCGG CGTTGGCAAA
ACCGAAATCG CGCGGCGCCT GGCACGGCTC GCCGATGCGC CTTTCATCAA GGTCGAGGCG
ACCAAGTTCA CCGAGGTCGG CTACGTTGGC AAGGATGTTG ATGCCATCAT CCGCGATCTG
GCCGACATCG CCGTCAAGCA GACGCGTGTT GCCGAGATGA AAAAAGTGCG CTCACGCGCG
GAAGACGCGG CCGAAGATCG GGTGCTCGAC GTCCTGATTC CGCCCCCGCG GGGTGATTTT
GGCGTGGTAC AAAACATGGA GCCCGAGAGT ATTGCGCGCC AGACCTTTCG CAAGAAATTG
CGCGAGGGCC AGTTGGCAGA CCAGGAAATT GAAATTGACC TGGCGCAGTC TGCGCCGCAA
CTGGAGATCA TGGGCCCCCC AGGCATGGAA GAGATGACCG AGCAGTTGCG TGGGATGTTT
GGCCAGATGG GACAGCAAAA GCGCCAGACG CGCAAGCTCA AAATCCCTGA GGCCCTGAAG
TTGCTCGTTG AAGAAGAGGC GGCCAAACTG GTCAACGAAG AAGAGATCAG GATGCAGGCG
CTGCACATGC TGGAGCAAAA CGGCATTGTC TTCATTGACG AGATTGACAA GGTCACCTCG
CGCGCTGAAG GCAATGGAGC CGAGGTATCG CGCCAGGGTG TACAGCGGGA TCTGCTGCCG
CTGGTCGAAG GCACCACGGT GTCGACCAAA TACGGCATGG TCAAGACAGA TCACATTTTG
TTCATCGCTT CGGGTGCTTT CCATCTGAGC AAACCAAGTG ACCTGATCCC CGAGTTGCAA
GGGCGTTTCC CGATCCGGGT TGAGCTTCAG TCTCTGTCAG TGCAGGACTT TGTGGCCATC
CTGACGCAAA CCGCTGCCTC GCTGGTCAAG CAGTACCAGG CCCTGTTGGC CACGGAAAAC
GTGCACATTG AGTTCCTCGA TGAGGGCATC ACGCGCTTGG CGCACATTGC GTTCGACGTG
AATGAGCGCA CCGAAAACAT TGGGGCCCGG CGTCTGTCGA CCGTCATGGA GCGCTTGCTC
GACGAGGTGA GTTTTGACGC TGCCAATCTG GGCGGTCAAA CGATTCACGT CGACGCTGCC
TATGTGCAGG CACGACTCGG TGAGCTGAGC CAGGATGAGG ACCTTTCGCG TTACATTTTG
TAA
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| Protein sequence | MTPQEIVFEL DKHIVGQQQA KRAVAIALRN RWRRQQVEPG LRAEITPKNI LMIGPTGVGK
TEIARRLARL ADAPFIKVEA TKFTEVGYVG KDVDAIIRDL ADIAVKQTRV AEMKKVRSRA
EDAAEDRVLD VLIPPPRGDF GVVQNMEPES IARQTFRKKL REGQLADQEI EIDLAQSAPQ
LEIMGPPGME EMTEQLRGMF GQMGQQKRQT RKLKIPEALK LLVEEEAAKL VNEEEIRMQA
LHMLEQNGIV FIDEIDKVTS RAEGNGAEVS RQGVQRDLLP LVEGTTVSTK YGMVKTDHIL
FIASGAFHLS KPSDLIPELQ GRFPIRVELQ SLSVQDFVAI LTQTAASLVK QYQALLATEN
VHIEFLDEGI TRLAHIAFDV NERTENIGAR RLSTVMERLL DEVSFDAANL GGQTIHVDAA
YVQARLGELS QDEDLSRYIL
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