Gene Rfer_3431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3431 
Symbol 
ID3960491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3819845 
End bp3821587 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content60% 
IMG OID637918251 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_524671 
Protein GI89902200 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGCA GCATTGCCTA CACCTCAAGC CCTTTGCTGG CGAGTCGCAC GCCGCTGTGG 
CGCAGCAAGT TCATTGTGGC GGCCATCGCG CTGGGCTCGG TCGGCCTGAT TACACGCGCT
GCCTATATTC AGGTCGTGGC CAATGATTTC TTTCAAAAAC AAGGCCAGGT TCGGTTTGGA
CGCACGCTCG CCTTGCCGGC CAATCGGGGC CGCATTCTGG ACCGCAACGG CTTGATCCTC
GCGTCCAGCA TTCCGGCCCC AAGCATCTGG GCCATTCCCG AAGATGTGGA GCGCGACCCG
GCCCGTTTGC AGCAGTTGGC CCAACTGCTG GAGATGCCCA TGGCTGAGCT CAACAAGCGA
TTGGCGAACG AAGACAAGAC CTTTGTCTGG CTCAAACGCC AGGTGGATGA CCCTGTTGCC
AAGCAGATCG CTGCGCTGGG CATCAAGGGT ATTTACCAAC GCAAGGAATA CAAGCGCCAG
TATCCCGAAG GTGAGGCCGC CGCGCATGTG GTGGGTTTCA CCAACGTGGA AGACCTGGGC
CAGGAGGGCA TTGAGCTTGC CTTCAACAAA GACCTGGCCG GTCATGCCGG GTCGCGCGGC
GTCATCAAAG ACCGAATGGG CCGGGTGGTT GAGTCGGTGG GCGAGCAGAT TGAGCCGGTG
GATGGCCGTG ATCTGCAGCT CAGTATTGAC AGCAAGATTC AGTTCTTTGC CTACCAGAAG
CTGCGCGATG CCGTGTTGCT GCGCAAAGCC AAGGCTGGCA GTGTGGTGGT GCTCGATGTC
GTGACCGGTG AAGTGCTGGC GCTGGCCAAC TTTCCCAGTT ACTCGCCCGA CAAACGGCAA
AACTTGACCG GTGCCCAGTT GCGCAACCGG GCGCTGACGG ACACATTTGA GCCCGGTTCA
GTGATGAAGC CGTTCACGAT CGGACTGGCC CTGGAGACTG GGCGCGTCAC ACCGCAGACC
CTCATTGACA CTGGCGCGGG CAAGCTCACC ATCGCGGGTT CGACTATTTC CGACTCGCAC
CCCAATGGTG TGTTGACGGT AGAGGGTGTG ATTCAAAAAT CCAGCAATAT TGGCACCACC
AGGATTGCCA TGCAGATGCA GCCGCGCGAA ATGTGGGAAA TATTTTCACA GGCCGGCTTT
GGACAGAAGC CGCAGATCAG TTTTCCGGGC ACGGTGTCAG GGCGGCTGCG CCCCTACAAG
ACCTGGCGGC CGATCGAGCA GGCCACCATG TCGTATGGCT ACGGGTTGTC GGCCTCGCTG
TTCCAGATGG CCCGCTCGTA CACCATTTTT TCAAATGACG GCCAGATTAT CCCGATCACG
ATGCTCAAGA GCAGTGAGCC TGCATTGGGA GTGAGGGTGT TGTCGGTGCG TACCGCAGGC
CAGGTCCGCA AGATGCTGCA ACTGGCAGCG GGTCCGGGTG GCACGGGGCA GAAAGCGCAA
ACCATCGGCT ACTCGGTAGG GGGGAAATCG GGCACCGCTT ATAAACAGAT CGGCAAGGGT
TATGGCAGCG CGGGCAATCG CAAATACCGG GGCTGGTTTG TGGGCATGAC GCCAATCGAG
AAGCCTCGAA TCATCATTGG CGTGATGATC GATGAGCCCA GTGCCGGACA GTATTTTGGT
GGCGCGGTGG CCGCGCCCGT GTTCAGCGAG GTGGCGCAGC AGACCCTGCG CATGATGGGT
GTCCAGCCAG ACATGGCGGT CAAACCCCAG ATCGTGGCGC AGGCGGAAGA GGAGAGTCTC
TGA
 
Protein sequence
MSRSIAYTSS PLLASRTPLW RSKFIVAAIA LGSVGLITRA AYIQVVANDF FQKQGQVRFG 
RTLALPANRG RILDRNGLIL ASSIPAPSIW AIPEDVERDP ARLQQLAQLL EMPMAELNKR
LANEDKTFVW LKRQVDDPVA KQIAALGIKG IYQRKEYKRQ YPEGEAAAHV VGFTNVEDLG
QEGIELAFNK DLAGHAGSRG VIKDRMGRVV ESVGEQIEPV DGRDLQLSID SKIQFFAYQK
LRDAVLLRKA KAGSVVVLDV VTGEVLALAN FPSYSPDKRQ NLTGAQLRNR ALTDTFEPGS
VMKPFTIGLA LETGRVTPQT LIDTGAGKLT IAGSTISDSH PNGVLTVEGV IQKSSNIGTT
RIAMQMQPRE MWEIFSQAGF GQKPQISFPG TVSGRLRPYK TWRPIEQATM SYGYGLSASL
FQMARSYTIF SNDGQIIPIT MLKSSEPALG VRVLSVRTAG QVRKMLQLAA GPGGTGQKAQ
TIGYSVGGKS GTAYKQIGKG YGSAGNRKYR GWFVGMTPIE KPRIIIGVMI DEPSAGQYFG
GAVAAPVFSE VAQQTLRMMG VQPDMAVKPQ IVAQAEEESL