| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3430 |
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| Symbol | murE |
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| ID | 3960490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3818229 |
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| End bp | 3819845 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637918250 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_524670 |
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| Protein GI | 89902199 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGAGT TCCAAACGCC CATTGAGGCT GTCGCCTGGT TGCGCAGCCG TGTCACTGGC
ACGCTGCAAA CCGACAGCCG CAAGCTGCAG CCCGGCGACG GCTTCATTGC CTGGCCCGGC
GCGGCTGCTG ATGCGCGTCA GTTTGTGGCG AGTGCCTTGG CCAGCGGCGC TGGCGCCTGC
CTGGTCGAGC GCTTGGGCGC CGAGGCTTAT GCCTTCAGCA GCGACAAGGT CGCCGCTTAC
GCCAATCTCA AAGCCGCCAG TGGCCTGATT GCCGCCGCGT ATTTCGACCA GCCCTCGCAA
CAACTGGACG TGCTGGCAGT GACCGGCACC AACGGCAAAA CATCCACTGC CTGGTGGCTG
GCACAAGCGC TATCGAATTT GAAGCTTGTT ACGCCCATTC CATGCGGGTT GGTGGGTACT
TTAGGCATAG GAACACCGCC GCCACCAGCG TCTGGACAGC CGCCCGTCGG GCTTGTCGCA
GCGCACGGCG CTGATCCCCT CGCCGGCATG GTGGCGACCG GCCTGACCAC GCCCGATCCG
GTGCTGCTGC AGCAAGCCTT GCGGCGCTTT GTGGACCGCG GGTTCCAAGC TTGCGCGCTG
GAGGCGTCCT CCATCGGCCT GCAAGAACAG CGGCTGAACG GCACCCACAT CCGGACCGCT
ATCTTCACCA ACTTCACGCA AGACCATCTG GATTACCACG GCGCCATGGC GGCTTATTGG
CAGGTCAAGG CGAGCCTGTT TCAGTGGCCG GGACTGCAGT CGGCTGTCAT CAATATTGAT
GACCCGCAGG GTGCTGAGTT GGCTGAAACG CTGCGCGGCA AACTGCTCGA TGTCTGGACT
GTGTCTTGCG TTGCAGAGGC CCGGCTGCAG GCCTGCGACA TTGTTCATGA TGCGCCGGGT
TTGCGCTTTA CGGTGCTGGA GCACGGGCCT GACGGCGCGA ACGGCCCAGG CGGGGCGGGT
CAGCGCCATG TGCTGCAGAC CCGGCTGATC GGGAGCTACA ACGTCGCCAA CCTGTTGGGC
GTGATGGCGG CCATGCGTTG CCTGGGCGTG CCGCTGGCAG CGGTCGTCGC GTCCTGTGCC
GACTTGACTG CGGTGCCCGG ACGAATGGAA TGTTGGGGGG CGCCAGGCCA ACCGCTGGCC
GCAGTGGACT ACGCCCACAC GCCCGACGCC CTGGGCAAAG CACTGCAGGC GCTGCGCCCC
TTGGCTGATC AGCGCGGCGG TCGGCTCTGG TGTGTTTTTG GTTGTGGCGG TGACCGCGAT
ACGGCCAAGC GACCCCTGAT GGGCGCGATC GCGGCCAGCC ACGCCGACTG CGTGGTGGTC
ACCAGCGACA ACCCGCGCAG CGAAAGGCCC GATGCCATCA TCAGCCAGAT ATTGCTTGGC
CTGACCGGTT ACCCCGCGCT GACGGTCGAA CCCGACCGGG CGCGGGCGAT TGCACAGGCG
ATCGCGCAGG CCGCACCCCA GGATGTGCTG CTGATCGCCG GTAAAGGCCA TGAAGACTAC
CAGGAGGTGG CGGGCCAGCG CCTGCCGTTC TCGGACGCCG AGCAGGTGCG GCGGGCATTG
GGCCAGTGGG TTTCGCCTGA CGCTGGACCG ACCGCCGAGC CGGGAGCGCA GGCATGA
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| Protein sequence | MLEFQTPIEA VAWLRSRVTG TLQTDSRKLQ PGDGFIAWPG AAADARQFVA SALASGAGAC
LVERLGAEAY AFSSDKVAAY ANLKAASGLI AAAYFDQPSQ QLDVLAVTGT NGKTSTAWWL
AQALSNLKLV TPIPCGLVGT LGIGTPPPPA SGQPPVGLVA AHGADPLAGM VATGLTTPDP
VLLQQALRRF VDRGFQACAL EASSIGLQEQ RLNGTHIRTA IFTNFTQDHL DYHGAMAAYW
QVKASLFQWP GLQSAVINID DPQGAELAET LRGKLLDVWT VSCVAEARLQ ACDIVHDAPG
LRFTVLEHGP DGANGPGGAG QRHVLQTRLI GSYNVANLLG VMAAMRCLGV PLAAVVASCA
DLTAVPGRME CWGAPGQPLA AVDYAHTPDA LGKALQALRP LADQRGGRLW CVFGCGGDRD
TAKRPLMGAI AASHADCVVV TSDNPRSERP DAIISQILLG LTGYPALTVE PDRARAIAQA
IAQAAPQDVL LIAGKGHEDY QEVAGQRLPF SDAEQVRRAL GQWVSPDAGP TAEPGAQA
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