Gene Rfer_3428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3428 
SymbolmraY 
ID3960488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3814957 
End bp3816135 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content59% 
IMG OID637918248 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_524668 
Protein GI89902197 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0977161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCCTA GCCTCGCCCA GTGGTTGCAG ACGCTGTCGC CTGAATTCGG TTTTCTGCGG 
GTCTTCCAGT ACCTGACGTT TCGTGCCGTC ATGGCGGCCT TGACAGCGCT GTTGATGGGT
CTGGCGGCGG GGCCGTTCGT CATTCGCCGC TTGACGGAAC TCAAGATTGG TCAGCCGATT
CGCGGCTATG GCATGGACTC GCATCTGAGC AAGAGCGGCA CGCCCACCAT GGGCGGGGCC
CTGATTCTGC TGTGCATCGT CATTGCCACC TTGTTATGGG TTGATCTGAG CAACCGCTTT
GTCTGGATCG TGCTGCTCGT CACGCTCGGA TTTGGCGCGA TCGGCTGGGT CGATGACTGG
CGCAAGGTCG TCAACAAAGA CCCGGAGGGC ATGCGCTCGC ACGAAAAATA TTTCTGGCAA
TCGTTCATTG GCCTGCTGGC CGCCCTGTAT CTGGTGTTCA GCATTTCGGA GAACTCCAAT
ATGCGCGTGC TGGAGCTTTT TTTCAGCTGG GTGCGCTCGG GCTTTGATCT GAATTTGCCA
CCCAAGGCCG GGCTGCTGCT GCCGTTCTTC AAGGAGATCA GCTATCCGCT GGGTGTGCTC
GGCTTTGTCA TCCTGTCCTA TCTGGTGATT GTGGGCGCCA GCAACGCGGT GAATCTGACC
GATGGTCTGG ACGGTTTGGC CATCATGCCG GTGGTGCTGG TGGGCAGCTG CCTGGGCATT
TTTGCCTACG TGACGGGCAG TGCGGTGTAT TCCAAATACC TGTTCTTCCC GCACATTCCG
GGCGCGGGCG AGCTGCTGAT TTTCTGTTCC GCCATGTCGG GCGCGGGTCT GGCCTTCTTG
TGGTTCAACA CCCATCCAGC CCAGGTGTTC ATGGGTGACG TGGGCGCCTT GGCCCTGGGG
GCAGCGTTGG GCACGGTCGC GGTGATCGTG CGCCAGGAAA TCGTGCTGGC CATCATGGGC
GGCGTTTTTG TGGTGGAGGC GCTGTCGGTC ATGTTGCAGG TGAGCTGGTT CAAGTTCACC
AAGAAGCGTT CTGGCCAGGG GCGGCGCCTG TTCAAGATGG CGCCCTTGCA CCATCACTTT
GAGAAAAGCG GCTGGAAAGA AACGCAGGTC GTGGTGCGTT TCTGGATCAT CACCATGCTC
TTGTGCCTGG TCGGCCTGTC CACCTTGAAG CTGCGGTAA
 
Protein sequence
MLPSLAQWLQ TLSPEFGFLR VFQYLTFRAV MAALTALLMG LAAGPFVIRR LTELKIGQPI 
RGYGMDSHLS KSGTPTMGGA LILLCIVIAT LLWVDLSNRF VWIVLLVTLG FGAIGWVDDW
RKVVNKDPEG MRSHEKYFWQ SFIGLLAALY LVFSISENSN MRVLELFFSW VRSGFDLNLP
PKAGLLLPFF KEISYPLGVL GFVILSYLVI VGASNAVNLT DGLDGLAIMP VVLVGSCLGI
FAYVTGSAVY SKYLFFPHIP GAGELLIFCS AMSGAGLAFL WFNTHPAQVF MGDVGALALG
AALGTVAVIV RQEIVLAIMG GVFVVEALSV MLQVSWFKFT KKRSGQGRRL FKMAPLHHHF
EKSGWKETQV VVRFWIITML LCLVGLSTLK LR