Gene Rfer_3417 details

Gene Information

• Locus tag: Rfer_3417
• Symbol: ruvC
• ID: 3963343
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: -
• Start bp: 3800714
• End bp: 3801262
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637918237
• Product: Holliday junction resolvase
• Protein accession: YP_524657
• Protein GI: 89902186
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.124566
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAATCC TCGGCATTGA CCCCGGCTTG CGCACCACCG GCTTTGGTGT GATTGACGTC 
GCGGGCGCTG ACCTGACCTA CGTTGCCAGC GGCACCATCA GCACCCTGCA TCTGGACAAA 
GGCCAGCTGC CGGCGCGGCT CAAGGTGCTG TTTGATGGCA TCCGCGAGGT GGTGGCGCGC 
TACCAGCCTG AGTGCGCCTC GGTCGAGATC GTATTTGTCA ACGTCAACCC GCAATCCACC 
TTGCTGTTGG GGCAAGCGCG TGGCGCCTGC ATCACGGCGC TGGTCTCTGG CGATTTGCCG 
GTGGCTGAAT ACACCGCGCT GCAAATGAAA CAGGCGGTGG TGGGCTATGG CCGCGCCGAC 
AAAAGCCAGG TTCAGGAGAT GGTGCGTCGC TTGCTGGCCC TGCCGGGTCT GCCGGGCCCG 
GACGCCGCCG ACGCGCTGGG GCTGGCCATT ACGCACGCCC ATGCGGCCAA GGCCCTGGCC 
CGGCTGGCGC AAGCCGATGG TGTGATGGGC GCGGGCAGCG GCAAGTACAA GGCCGGGCGC 
AGTCGCTGA 

 

Protein sequence

MRILGIDPGL RTTGFGVIDV AGADLTYVAS GTISTLHLDK GQLPARLKVL FDGIREVVAR 
YQPECASVEI VFVNVNPQST LLLGQARGAC ITALVSGDLP VAEYTALQMK QAVVGYGRAD 
KSQVQEMVRR LLALPGLPGP DAADALGLAI THAHAAKALA RLAQADGVMG AGSGKYKAGR 
SR