Gene Rfer_3412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3412 
Symbol 
ID3963338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3796878 
End bp3797735 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content66% 
IMG OID637918232 
ProductTonB-like 
Protein accessionYP_524652 
Protein GI89902181 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCTGT CATCCCTCAG CCCGCTGCAG TTGGCGCTCG GCGCCTCGAT TGCCGTGCAC 
GCCGCGCTCT TGACGGTGCG CTTTGTGGAT CCGCAGGCCT TCAACCGCGT GTTTGAAGAC
ACCCCGCTGG AAGTCATTCT GGTCAATGCG CGCACCCAGG AGCGCCCCGA CAAGGCACGC
GCCATTGCCC AGGCCAACAT GGCCGGTGGC GGCGACGCCG AGCGCGGCCG CGCCACCAGC
CCGCTGCCGC CCGCGCTGAT CTCGGAAACG GGCGACGACA CCGAGGATCA AACGCAGCGC
CAACTGCAAA ACATGCAGGA ACAACAAACG CTGTTGCTGG CTCAGGTGAA AAGCATGCTG
GCGGCGCTGC CGCCCGCCGA CCCGCGCCAG GCCAGCGCGT CGCCCGAGCG CGCCGAGCGC
GAACAGAAAC GCCGCCAGCT GATCAGACTG CTGGCCGAGA TTGAGCGGCG CATCAACCAG
GAAAACGCCC GCCCCAAAAA GCGCTACATC AGCCCGGCCA CCCGGGAGGC GGTGTACGCC
ATCTACTACG ACCACCTGCG CCGCGCCATC GAAGACAAGG GCACACAGAA CTTCCCCGAG
CTGGCGGGCA AGAAGCTGTA TGGCGAGCTG GTCATGTCGG TTACCGTTAA TTTTGACGGG
CAGATTCTGA CCACCCGGAT CGAGCAAAGC TCGGGCAACC GGACCCTGGA CCGGCGCGCT
GAGGCCATTA CCCGCAGTGC GGCGCCGTTT GGCGCCTTTT CCGCCGCCAT GCGTCGCCGG
GCCGACCAGA TCGTGGTGAT CTCGGCCTTC AAGTTCACGC GCGACGAGAC ACTGGAAACC
CGGCTCACAT CCCAATGA
 
Protein sequence
MKLSSLSPLQ LALGASIAVH AALLTVRFVD PQAFNRVFED TPLEVILVNA RTQERPDKAR 
AIAQANMAGG GDAERGRATS PLPPALISET GDDTEDQTQR QLQNMQEQQT LLLAQVKSML
AALPPADPRQ ASASPERAER EQKRRQLIRL LAEIERRINQ ENARPKKRYI SPATREAVYA
IYYDHLRRAI EDKGTQNFPE LAGKKLYGEL VMSVTVNFDG QILTTRIEQS SGNRTLDRRA
EAITRSAAPF GAFSAAMRRR ADQIVVISAF KFTRDETLET RLTSQ