| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3412 |
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| Symbol | |
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| ID | 3963338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3796878 |
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| End bp | 3797735 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637918232 |
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| Product | TonB-like |
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| Protein accession | YP_524652 |
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| Protein GI | 89902181 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCTGT CATCCCTCAG CCCGCTGCAG TTGGCGCTCG GCGCCTCGAT TGCCGTGCAC
GCCGCGCTCT TGACGGTGCG CTTTGTGGAT CCGCAGGCCT TCAACCGCGT GTTTGAAGAC
ACCCCGCTGG AAGTCATTCT GGTCAATGCG CGCACCCAGG AGCGCCCCGA CAAGGCACGC
GCCATTGCCC AGGCCAACAT GGCCGGTGGC GGCGACGCCG AGCGCGGCCG CGCCACCAGC
CCGCTGCCGC CCGCGCTGAT CTCGGAAACG GGCGACGACA CCGAGGATCA AACGCAGCGC
CAACTGCAAA ACATGCAGGA ACAACAAACG CTGTTGCTGG CTCAGGTGAA AAGCATGCTG
GCGGCGCTGC CGCCCGCCGA CCCGCGCCAG GCCAGCGCGT CGCCCGAGCG CGCCGAGCGC
GAACAGAAAC GCCGCCAGCT GATCAGACTG CTGGCCGAGA TTGAGCGGCG CATCAACCAG
GAAAACGCCC GCCCCAAAAA GCGCTACATC AGCCCGGCCA CCCGGGAGGC GGTGTACGCC
ATCTACTACG ACCACCTGCG CCGCGCCATC GAAGACAAGG GCACACAGAA CTTCCCCGAG
CTGGCGGGCA AGAAGCTGTA TGGCGAGCTG GTCATGTCGG TTACCGTTAA TTTTGACGGG
CAGATTCTGA CCACCCGGAT CGAGCAAAGC TCGGGCAACC GGACCCTGGA CCGGCGCGCT
GAGGCCATTA CCCGCAGTGC GGCGCCGTTT GGCGCCTTTT CCGCCGCCAT GCGTCGCCGG
GCCGACCAGA TCGTGGTGAT CTCGGCCTTC AAGTTCACGC GCGACGAGAC ACTGGAAACC
CGGCTCACAT CCCAATGA
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| Protein sequence | MKLSSLSPLQ LALGASIAVH AALLTVRFVD PQAFNRVFED TPLEVILVNA RTQERPDKAR
AIAQANMAGG GDAERGRATS PLPPALISET GDDTEDQTQR QLQNMQEQQT LLLAQVKSML
AALPPADPRQ ASASPERAER EQKRRQLIRL LAEIERRINQ ENARPKKRYI SPATREAVYA
IYYDHLRRAI EDKGTQNFPE LAGKKLYGEL VMSVTVNFDG QILTTRIEQS SGNRTLDRRA
EAITRSAAPF GAFSAAMRRR ADQIVVISAF KFTRDETLET RLTSQ
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