Gene Rfer_3406 details

Gene Information

• Locus tag: Rfer_3406
• ID: 3962190
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 3790195
• End bp: 3790719
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637918226
• Product: UreE urease accessory-like
• Protein accession: YP_524646
• Protein GI: 89902175
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG2371] Urease accessory protein UreE

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.321277
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCACCA TCTCCAAACT CATCCCCCAA GGCCAAGGCC TGGCACCGGT TCTGCTCAGG 
CGAGCAAGCA CGATGGAACT TGACTGGGAC GTGCGGCAAA AAAGCCGCTT TGAAGCCACC 
GACTCGGCCG GTCGACAGCT TGGCGTGTTT TTGCCCCGCG GCACGGTGGT GCGCGGCGGC 
GACGTGCTGG TCGCTGAAGA TGGCTCGCTG GTCAAGGTCG ACGCTGCGCC GCAGCCTGTG 
CTGCGCATCA CACCCTGTAG CAGCCACGGC ACCGCGTTTG ACCTGACGCG CGCCGCCTAC 
CACCTGGGCA ATCGCCATGT GCCGATTGAG CTCAAGCCCG ACCACCTCAA AATCGAGCCC 
GACCATGTGC TGGCCGACAT GCTGCGCGCC ATGCACCTGA CGGTGCTGGC TGTCAACGAG 
CCATTCGAGC CTGAGAACGG CGCCTACGCC ACGGGTGGGC ACGCGCATGA CCACGACGGC 
GAGCCTGAAC ACGTGCATGG CCCCGGCTGC CAGCACGCGC ATTGA 

 

Protein sequence

MLTISKLIPQ GQGLAPVLLR RASTMELDWD VRQKSRFEAT DSAGRQLGVF LPRGTVVRGG 
DVLVAEDGSL VKVDAAPQPV LRITPCSSHG TAFDLTRAAY HLGNRHVPIE LKPDHLKIEP 
DHVLADMLRA MHLTVLAVNE PFEPENGAYA TGGHAHDHDG EPEHVHGPGC QHAH