| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3389 |
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| Symbol | |
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| ID | 3962173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3766015 |
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| End bp | 3766584 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637918209 |
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| Product | alkylhydroperoxidase |
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| Protein accession | YP_524629 |
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| Protein GI | 89902158 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGCCC AACCCATTCT CCACACGCTG CACCCCGTCA ACCCCGCCAC GGCCGAGGGT
GCGCAAAAGG AGATTCTCGA CAAGGCCGTC AAGCAAGTCG GCTTCCTGCC CAATATGTAC
GCCAACATGG CCAACACCCC GGCCGTGCTG AGCACCTATC TTCATGGGTA TGCCTTGTTC
CGCTCCGAGT CGGGCCTGAA ACCGGCCGAG CAGGAAGTCG TGTTCCTGGC CGTGAGCCAG
GTCAATGGCT GCAACTACTG CACCGCGGCG CACAGCATGA TGGCCGACAA GAAGTCCGGT
GTGCCCGCCG ATGTCCTGCA GGCCATTCGT GCCCATCAAC CGATCCCGAG CGCCCGGTTC
GCCGCCTTGT ATGCCTTGAC CGCAGAGATG GTCAGCACGC AGGGCCGTCC CGGTGCCGCG
ACCGTGAAGG CGTTCCTGGA TGCCGGTTTC CAGGAAAAGG ATGTGCTCTA CATCGTGCTG
GCGATCGCCG TCAAGACCCT GAGCAACTAC ACCAACCATG CACTTGCCAC ACCAGTGGAT
GAGGTGTTCT CGGCCTATCG GGTGGATTGA
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| Protein sequence | MSAQPILHTL HPVNPATAEG AQKEILDKAV KQVGFLPNMY ANMANTPAVL STYLHGYALF
RSESGLKPAE QEVVFLAVSQ VNGCNYCTAA HSMMADKKSG VPADVLQAIR AHQPIPSARF
AALYALTAEM VSTQGRPGAA TVKAFLDAGF QEKDVLYIVL AIAVKTLSNY TNHALATPVD
EVFSAYRVD
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