| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3387 |
|---|
| Symbol | |
|---|
| ID | 3960959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 3764761 |
|---|
| End bp | 3765402 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637918207 |
|---|
| Product | negative transcriptional regulator |
|---|
| Protein accession | YP_524627 |
|---|
| Protein GI | 89902156 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2808] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTACC TGCCGCCTCA CTTTGAAGAG ACCGATGCCG CCACGCTGCA TGCGCTGGTG
GGCGCCTATC CGCTGGCCAC CTGGGTGGTG TCGCACCAGG GGGAGTTGCT GGTCAACCAT
ATCCCGTTTC TGCTGGACGC CCAGCGCGGT GAACACGGCA CGCTGGTCGG GCATGTGGCG
CGCGCCAACC CGGTGTGGCA GGCGCTGGGC GAGGGCGCCT CGTCGGTGGC CGTGTTCACC
GGGGCGCAAG CCTATGTGTC GCCCAGTTGG TATCCTGGCA AACTTGTCCA CGGCAAGGCG
GTGCCGACCT GGAACTACGC CACGGTTCAT GCCCACGGTG TGCCGCAGGC GTTTGACGAT
CGGGTCCGGC TGTTGGACCT GGTCACCCGC CTGACCCAGG TGCACGAGGC CAGTCAGGCC
CAGCCCTGGC AGGTGCTTGA TGCGCCCGCC GATTACATCG ACAGCATGCT CAAGGCCATC
GTCGGCATCG AGATTCCGGT GCAGCGCTGG GTCGGCAAAT GGAAGGTCAG CCAAAACCGC
CCAGTCGCGG ACAGACAAGG TGTTGTTGCC GGACTGAGCG CACAAGGCAC CGCGGCAGCG
CTGCAGATGG CGGCCCTGGT GCAACAAAAG ACCAGGCCAT GA
|
|---|
| Protein sequence | MTYLPPHFEE TDAATLHALV GAYPLATWVV SHQGELLVNH IPFLLDAQRG EHGTLVGHVA
RANPVWQALG EGASSVAVFT GAQAYVSPSW YPGKLVHGKA VPTWNYATVH AHGVPQAFDD
RVRLLDLVTR LTQVHEASQA QPWQVLDAPA DYIDSMLKAI VGIEIPVQRW VGKWKVSQNR
PVADRQGVVA GLSAQGTAAA LQMAALVQQK TRP
|
|---|
| |