Gene Rfer_3382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3382 
Symbol 
ID3960954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3758917 
End bp3760179 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content47% 
IMG OID637918202 
Producthypothetical protein 
Protein accessionYP_524622 
Protein GI89902151 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACC CTTTCGGATT AGCGCAGAAC GAACGGATCG AAAGATCGGG CGTACGAAAA 
GTTTTTACGC CGCATGCCCC GGTAAAGATC CAAGAGCTCT TGTTTGGACG TTCCGCGGCA
CTAAAGCAAC TTATCAATCA AATACACACT CCCGGTGCAT TTCCTATTCT TTTTGGTGAT
CGAGGCGTCG GAAAAACTTC AATTGCCATG ATTGTTCTAA CACTTGTTGA ACTCTCAATG
CGCGAAAAAG GTAATGTGTA CATTGACTCG AAAAGATGTT CATCAAAAGA GACGTTGATC
TCAATCTTCG GCAAGCTATT GCAGAAGTGC GGCATGGACC TTGAGCTAAT CGAGTCAACT
CAAACTAGTG AGTCAGGAGG TGGTGCCGGA ATACACGCTG GGTTCATTAA AGCGGATATC
GGTGCCAAGC GAACAAACAC TCAAAAGCAT GGGGCAGCGT TTAAAAATGT CACCCCGTCA
ACCATTGCAG AATTAATCCT AGCAAACCTT GACTGTGGCC TGCTGATCAT CGACGAGACT
GACGCCATCG AAGATGACCA AGTTAAATAC CAACTTGCAG AGATTGTGAA GCTCCTCAGT
GATGGTCATT CCAAGTTTAA GATTATGCTT GTCGGAGTTG CTGAATTGTC TTCGACACTT
ACTGCTGGGC ATCCATCGAT CGGGCGCTGC GCCGTTGAAA CCAAGCTTGA TCTCATGGCC
GATGCTGAAA TTCAGCAAAT TGTTAAAACT GGCGCAGTTC GAATCAAACC CGCTATGGAT
TTTGATCGGG AAGTGGTGAA GCGTATTGCG CAACTGTCAG GTGGTTACCC ATACTTTACG
CACCTATGTG CACTTAAGTG CGTCGAAGAT GCCCTCCGCG AAAACAGAAA ATTTATACGA
ATCCATCATT TGCCATCAGC ACTAAAGTCG GCTGCTCTAG AGGCTGAACA AACATTGCGT
GCGCAGTTTG AAACAGCGAC GTCTTCGGCT ACCACCGGAA TGTTCCGGGT CGTTGTAGAC
GCCGCATCTC GGTTTGGTAG TGAGAATTTT TCTGCAGCCG ATCTAAGAGC AAAGATTGAA
AACATAAGCA CGCACCACAT AACCCAGGGC GCGTTGAACA ATCTTTTCAA GAAGCTCGTT
AGCGACAACC ACGCGCGCAT TTTGCATCGC GTAGCGAAAG GAACATATAG ATTTTCTGAT
CCGCGGATGC CAAGCTACGT AAAAATTGTG TGCGAAAGCG AATGTCATTA CCCCAATAAA
TGA
 
Protein sequence
MNDPFGLAQN ERIERSGVRK VFTPHAPVKI QELLFGRSAA LKQLINQIHT PGAFPILFGD 
RGVGKTSIAM IVLTLVELSM REKGNVYIDS KRCSSKETLI SIFGKLLQKC GMDLELIEST
QTSESGGGAG IHAGFIKADI GAKRTNTQKH GAAFKNVTPS TIAELILANL DCGLLIIDET
DAIEDDQVKY QLAEIVKLLS DGHSKFKIML VGVAELSSTL TAGHPSIGRC AVETKLDLMA
DAEIQQIVKT GAVRIKPAMD FDREVVKRIA QLSGGYPYFT HLCALKCVED ALRENRKFIR
IHHLPSALKS AALEAEQTLR AQFETATSSA TTGMFRVVVD AASRFGSENF SAADLRAKIE
NISTHHITQG ALNNLFKKLV SDNHARILHR VAKGTYRFSD PRMPSYVKIV CESECHYPNK