| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3381 |
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| Symbol | |
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| ID | 3960953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3757213 |
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| End bp | 3758472 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637918201 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_524621 |
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| Protein GI | 89902150 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGTC GTTTCACTCT CAAGGCACTC ACCGCTGCCG TCGCCCTCAC CACCCTCTCA
AGCCTGCCAG CTTTTGCCGC CGACACCATC AAGGTCGGCG TTTTGCACAG CCTCTCGGGC
ACCATGGCCA TTTCGGAAAC CGTGTTGAAA GACACCGTGC TGATGGCGAT TGACGAGATC
AACGCCAAGG GGGGCGTGCT GGGCAAGAAG CTGGAGCCCG TGGTGGTGGA CCCCGCCTCC
AACTGGCCCC TGTTTGCCGA AAAAACCAAG CAGTTGCTGG GGCAAGACAA GGTCGCCGTC
ATCTTCGGTT GCTGGACTTC GGTGTCACGC AAATCGGTGT TGCCGGTGCT GGAAGAAATG
AACGGCCTGC TGTTCTACCC CGTGCAGTAC GAGGGTGAAG AGCTGTCCAA AAACGTGTTC
TACACCGGTG CCGCGCCCAA CCAGCAGGCC ATTCCTGCGG TGGACTATTT GATGAGCAAG
GATGGCGGCG CGGCCAAGCG TTGGGTCTTG CTGGGCACCG ACTATGTCTA CCCCCGCACC
ACCAACAAGA TTTTGCGCGC CTACCTGAAA TCCAAGGGCG TGAAAGACAC CGACATCGAC
GAAAAGTACA CGCCGTTTGG CCACTCCGAT TACCAGACCA TCGTGGCTGA CATTAAGAAG
TTCTCCGCTG GTGGCAAGAC CGCCGTGGTG TCCACCATCA ACGGTGACTC CAACGTGCCG
TTCTACAAAG AACTCGGCAA CGCGGGCCTG AAGGCCAAAG ACGTGCCGGT GGTTGCGTTC
AGCGTGGGTG AAGAAGAGCT GCGCGGTGTT GACACGAAAC CGCTGGTGGG CCACCTGGCG
GCCTGGAACT ACTTCATGTC GATCAAGAAT CCGACCAACA CCGAGTTCAT CAAGAAGTGG
ACTGCGTATG CCAAGGCCAA GAACCTGCCC GGCGCTGACA AGCCTTTGAC CAACGACCCG
ATGGAAGCCA CTTACATCGG CATCAACATG TGGAAGCAGG CGGTTGAAAA AGCCAAGTCC
ACCGATGTCG ACAAGGTCAT CGCCGCCATG GCGGGCCAGA CCTTCAAGGC GCCGAGCGGC
ATCGTGAGCA AGATGGATGA GAAGAACCAC CACCTGCACA AGTCGGTGTT CATTGGCGAG
GTCAAGGCCG ACGGCCAGTT CAACGTGGTC TGGAAGACCC CCGGCCCGGT CAAAGCCAAG
CCATGGTCGC CCTACATCGA AGGCAATGCG GGCAAGCCGG ATGAGCCGGT GAAGAAGTAA
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| Protein sequence | MQRRFTLKAL TAAVALTTLS SLPAFAADTI KVGVLHSLSG TMAISETVLK DTVLMAIDEI
NAKGGVLGKK LEPVVVDPAS NWPLFAEKTK QLLGQDKVAV IFGCWTSVSR KSVLPVLEEM
NGLLFYPVQY EGEELSKNVF YTGAAPNQQA IPAVDYLMSK DGGAAKRWVL LGTDYVYPRT
TNKILRAYLK SKGVKDTDID EKYTPFGHSD YQTIVADIKK FSAGGKTAVV STINGDSNVP
FYKELGNAGL KAKDVPVVAF SVGEEELRGV DTKPLVGHLA AWNYFMSIKN PTNTEFIKKW
TAYAKAKNLP GADKPLTNDP MEATYIGINM WKQAVEKAKS TDVDKVIAAM AGQTFKAPSG
IVSKMDEKNH HLHKSVFIGE VKADGQFNVV WKTPGPVKAK PWSPYIEGNA GKPDEPVKK
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