| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3378 |
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| Symbol | |
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| ID | 3960950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3753547 |
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| End bp | 3754422 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637918198 |
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| Product | ABC transporter related |
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| Protein accession | YP_524618 |
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| Protein GI | 89902147 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
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| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCTG ATCTGCTGGA GGAGGGCGCC CGCCGGGCCA GGGCGCACGC ACTGAAGACC
GGGCACGGCA AGACCGAATC CGGTGGCCGC GCCGCCGGCT TCTCGCGCCT TGCCACGCCG
GGTGAAGTGG ATGTGACCCA CGGCCGCATC CTCTACCTGG AAGACGTGAG TGTGAGTTTT
GACGGCTTCA AGGCCATCAA CAAGCTTTCG CTCGACATTG CGCCGGGCGA GTTGCGCTGC
ATCATCGGGC CGAACGGCGC GGGCAAGACC ACGATGATGG ACATCATCAC CGGCAAAACG
CGGCCTGACG AGGGCCGGGT TTACTTCGGC AGCACGATTG ATTTGCTGCG CTACACCGAG
CCTGAGATTG CACAGTTGGG CATCGGGCGC AAGTTCCAGA AGCCCACGGT GTTTGAGCAA
CTCACGGTGT TCGAGAACCT GGAGCTGGCC CTCAAGACCG ACAAGGCGGT GACCGCCTCT
CTGTTCTTCC GCCTGGACTC CACGCAGTCA GATCGCCTGC TTGAGGTCCT GCACACCATT
CACCTGACCG GCAACGCGAG CGCCCAGGCG GGCACTTTGA GCCACGGCCA AAAACAGTGG
CTGGAGATTG GCATGCTGCT GATGCAAGAC CCCAAGCTGC TGCTGCTCGA TGAGCCGGTG
GCCGGCATGA CGGACATTGA GGCCGAGCGC ACCGCCGAGC TGTTTTTGAG CCTCAAAGGC
AAGCACTCGC TGATGGTGGT GGAGCACGAC ATGAGCTTCA TCAACACCAT CTCCGACATC
GTCACCGTGC TCTGCGAGGG CGCGGTGCTG GCGCAGGGCA CGCTGGCGCA GGTGCAGGCG
GATGAGCGGG TGATCGAAGT CTATTTGGGC AGATGA
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| Protein sequence | MTPDLLEEGA RRARAHALKT GHGKTESGGR AAGFSRLATP GEVDVTHGRI LYLEDVSVSF
DGFKAINKLS LDIAPGELRC IIGPNGAGKT TMMDIITGKT RPDEGRVYFG STIDLLRYTE
PEIAQLGIGR KFQKPTVFEQ LTVFENLELA LKTDKAVTAS LFFRLDSTQS DRLLEVLHTI
HLTGNASAQA GTLSHGQKQW LEIGMLLMQD PKLLLLDEPV AGMTDIEAER TAELFLSLKG
KHSLMVVEHD MSFINTISDI VTVLCEGAVL AQGTLAQVQA DERVIEVYLG R
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