| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3365 |
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| Symbol | |
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| ID | 3964228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3735773 |
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| End bp | 3737131 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637918185 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_524605 |
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| Protein GI | 89902134 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAA AAGTCTTCAT CAAAACCTAC GGCTGCCAGA TGAACGAGTA CGACTCGGAC
AAGATGAGCG ATGTGCTGGG CGCTGCGCAG GGCTACGAGC CCACTGACAA CGTGGAAGAA
GCCGACCTGA TCTTGTTCAA CACCTGCTCG GTGCGTGAAA AGGCGCAGGA GAAAGTGTTC
TCCGACCTGG GGCGTGTCAA ACACCTGAAG AAAAAAGGCG CGCTGATTGG CGTCGGTGGC
TGTGTTGCCA GCCAGGAAGG TGCCGCCATC ATCGAGCGCG CGCCTTATGT CGATGTGGTG
TTTGGGCCGC AAACCCTGCA CCGCCTGCCG CAACTGCTGG CCGAGCGCGA GCGGCTCAAC
CGCTCGCAGG TGGACATCAG CTTTCCCGAG ATCGAGAAGT TTGACCACCT GCCGCCCGCC
CGGGTCGAAG GCGCCAGCGC GTTCGTGAGC ATCATGGAAG GCTGCTCCAA ATACTGCAGC
TACTGCGTGG TGCCCTACAC CCGCGGCGAA GAAGTGAGCC GCCCGTTTGA AGATGTGCTG
GTCGAGGTCG CCGGCCTGGC GGATCAGGGT GTGAAAGAAA TCACGCTGCT GGGGCAAAAC
GTCAACGCCT GGCGGTCCCG GATGATTGGC GCTGCCAGCG CGCTCTCAAG CGAGATGGCC
GACTTCGCCA CCCTGCTGGA ATACGTGTCG GACATTCCCG GCATTGAGCG CATCCGCTAC
GTGACCAGCC ACCCCAACGA GTTCACGCCT TCACTGATTG CGGCCTACGA CAAGTTGCCC
AAGCTGGTCA GCCATTTGCA CCTGCCGGTG CAGCACGGCT CGGACCGCAT CCTGATGGCC
ATGAAGCGCG GCTACACCGC CATGGAATAC AAAAGCACGG TGCGCAAGCT GCGCGCCATC
CGGCCTGATA TGGCGCTGAG CAGCGACTTC ATCGTCGGCT TCCCCGGTGA AACCGAAGAC
GACTTCAGCA AGATGATGAA ACTCATCGAC GATGTGGGCT TTGACAACAG TTTCAGCTTC
ATCTTCAGCC CGCGCCCCGG CACCCCGGCG GCCAATCTGC ATGACGACAC CCCGCATGAG
GTGAAGCTGC GCCGGCTGCA GCATTTGCAG ACGGTCATCA ACGACAGCAT CAAGCGCATC
TCGGAGAGCC GCCTGGGGAC GGTGCAGCGC ATTCTGGTGG AGGGTGCCTC CAAGCGCGAC
AGCACCGAAC TGATGGGCCG CACCGAGTGC AACCGGGTCG TCAACTTCTG TGGCCAGCCG
CGCCTGATCG GGCAGATGGT GGATGTGGCC ATCACGGAGA CGCGCAGCTT CACGCTGCGC
GGTGAGGTGG TGACGCAAAA CGAGGTGCTG ACCGGGTAG
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| Protein sequence | MSKKVFIKTY GCQMNEYDSD KMSDVLGAAQ GYEPTDNVEE ADLILFNTCS VREKAQEKVF
SDLGRVKHLK KKGALIGVGG CVASQEGAAI IERAPYVDVV FGPQTLHRLP QLLAERERLN
RSQVDISFPE IEKFDHLPPA RVEGASAFVS IMEGCSKYCS YCVVPYTRGE EVSRPFEDVL
VEVAGLADQG VKEITLLGQN VNAWRSRMIG AASALSSEMA DFATLLEYVS DIPGIERIRY
VTSHPNEFTP SLIAAYDKLP KLVSHLHLPV QHGSDRILMA MKRGYTAMEY KSTVRKLRAI
RPDMALSSDF IVGFPGETED DFSKMMKLID DVGFDNSFSF IFSPRPGTPA ANLHDDTPHE
VKLRRLQHLQ TVINDSIKRI SESRLGTVQR ILVEGASKRD STELMGRTEC NRVVNFCGQP
RLIGQMVDVA ITETRSFTLR GEVVTQNEVL TG
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