Gene Rfer_3358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3358 
Symbol 
ID3964221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3728387 
End bp3729304 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content63% 
IMG OID637918178 
Producttriacylglycerol lipase 
Protein accessionYP_524598 
Protein GI89902127 
COG category[R] General function prediction only 
COG ID[COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTGGC TCGGTGGCTG TTTGCTGGCC CTGGCCCTGT TACCCGCTTC CTCCTGGGCG 
GCTGGCTACA CCCAAACCAG GTTCCCGATT GTGTTAGTGC ATGGCTTGTT CGGTTTTGAC
AATATCGGCC CGCTCGACTA CTGGTACGGC ATTCCTTCAG CCCTGCGCGC GGACGGTGCC
CAGGTGTATG TGACGCAGGT CTCCGCGGCC AACAGCACCG AAGTGCGGGG CGAGCAGTTG
CTGGTCCAGG TGAAACAGAT TCTGGCCGCC ACGGGCGCGA GCAAGGTGAA CCTGATCGGG
CACAGCCATG GCGGCCCGAC CATCCGCTAC GTCGCCTCGG TGCGCCCTGA TCTGGTGGCC
TCGGTCACCT CGGTTGGCGG TGTGAACAAG GGCTCGGCCG TGGCCGATGT GCTGCTGGGC
GTCGCACCGC CCGGATCGCT TTCCAACAGC GTGCTGATTT CGATCACCAA CGGCCTGGGC
TCCATCATCA GTTTCCTGTC CGGCGGCTCG GGCCTGTCGC AGGACTCACT GGCGGCGGCG
CAGTCGCTCA GTACCGCAGG TTCGCTCAAG TTCAATCTGG CTCATCCTGA AGGCCTGCCG
ACCACGGCCT GCGGCGAGGG CGCGTACGCG GTGCGGGGCG TGGCCTATTT TTCCTGGAGC
GGTGCCAAAC CCTACACCAA CGTGTTCGAC GTCCTGGACC CGGCCCTGGC GTTGACTTCG
CTTGCCTTTA ACGGGGCCAA GAACGACGGC TTGGTGGCGA GTTGTTCCAG CCGTCTGGGT
CGTGTGATCC GCGATGACTA CGCGTTGAAC CACCTGGACG AAGTCAATCA AACCGTCGGC
CTGGTGAATC TGTTCGAGAC CAACCCGGTC ACCTTGTACC GCCAGCAAGC CAACCGGTTG
AAGAACCTGG GCCTGTAA
 
Protein sequence
MTWLGGCLLA LALLPASSWA AGYTQTRFPI VLVHGLFGFD NIGPLDYWYG IPSALRADGA 
QVYVTQVSAA NSTEVRGEQL LVQVKQILAA TGASKVNLIG HSHGGPTIRY VASVRPDLVA
SVTSVGGVNK GSAVADVLLG VAPPGSLSNS VLISITNGLG SIISFLSGGS GLSQDSLAAA
QSLSTAGSLK FNLAHPEGLP TTACGEGAYA VRGVAYFSWS GAKPYTNVFD VLDPALALTS
LAFNGAKNDG LVASCSSRLG RVIRDDYALN HLDEVNQTVG LVNLFETNPV TLYRQQANRL
KNLGL