| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3353 |
|---|
| Symbol | |
|---|
| ID | 3964216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 3724104 |
|---|
| End bp | 3724547 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637918173 |
|---|
| Product | acetyl-CoA carboxylase, biotin carboxyl carrier protein |
|---|
| Protein accession | YP_524593 |
|---|
| Protein GI | 89902122 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0511] Biotin carboxyl carrier protein |
|---|
| TIGRFAM ID | [TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.108599 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTTA GAAAATTGAA GACGCTGATT GACCTGGTGT CAGAGTCAAA TGTCTCGGAG
TTGGAGATCA CAGAAGCCGA AGGCAAGGTT CGCATCGTCA AGGGCGGTGG CGCCATGGTT
CTTCAGCAGT ATGCGGCCCC CGCCGCTGCG CTGGCGCCTG TTGCAGTGGC GGCCCAGAGT
CCTGCGCCTG CGGTTGCGCC CACCGTTGCT GTTCACACCG TCAAATCGCC GATGGTTGGG
ACTTTTTATC GGTCTGCGTC CCCGGGCGCC AAGGCTTTTG TTGAGATTGG GGATGCCATC
AAAATCGGTG AAACCGTCTG CATTATTGAG GCCATGAAGA TTCTCAATGA AATCGAAGCC
GATAAATCGG GAACGGTGAC GCAAATTCTT TGCGAGAACG GACAGGCCGT TGAGTACGGA
CAGCCCTTGT TTGTGATTGA GTGA
|
|---|
| Protein sequence | MDLRKLKTLI DLVSESNVSE LEITEAEGKV RIVKGGGAMV LQQYAAPAAA LAPVAVAAQS
PAPAVAPTVA VHTVKSPMVG TFYRSASPGA KAFVEIGDAI KIGETVCIIE AMKILNEIEA
DKSGTVTQIL CENGQAVEYG QPLFVIE
|
|---|
| |