| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3351 |
|---|
| Symbol | prmA |
|---|
| ID | 3964214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 3721698 |
|---|
| End bp | 3722603 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637918171 |
|---|
| Product | ribosomal protein L11 methyltransferase |
|---|
| Protein accession | YP_524591 |
|---|
| Protein GI | 89902120 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2264] Ribosomal protein L11 methylase |
|---|
| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.908701 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAC TGACCTTGAT GTGCCCGGAG AACCGGGTTG GGACCTTGAG TGACACGCTC
GAAGCGCTGG ACGCCTTGAG TGTCAGTATT GAGGATGCCG ATGCCCAGAC CGATGCCGAG
CAGGCTTTGT TCGGAGAGCC TGGCATGCCG CCACCCAAAA CGGGTTGGCA GCGCTCGCGG
GTAAGCGCGT TGTATGCCTC TGAGGTGTTG GCGAAAGAAG CCTTGGACCT GTTGCAAGCG
CAGGATTTTT TTGCGGACTG CCAACTGTTG GGTATGCAGG CCGTGGCGGA GCAGGATTGG
GTGCGTTTGA CCCAGTCCCA GTTCACGCCG GTGGAAATTA CGCCAGAGTT CTGGATCGTG
CCGACCTGGC ACGAACCGCC CGCGCAGGCC CGCATTGTCA TTCGTCTCGA CCCGGGTTTG
GCGTTTGGCA CTGGCACCCA CCCGACCACC CGCATGTGTT TGCGCTGGAT TGCCCAGCGT
GGTCACGGCG ATGAATCCAC AGTCAATCAT GCGCTGGGCC GGGTGCTGGA TTACGGTTGT
GGCTCGGGCA TTCTCGCCAT CGGCGCGGCC AAGTATGGCG CCACTGACAT TGACGCAGTT
GATATTGATG ATGCGGCGGT TGAATCGACC GTGCTGAATG CGCAGGCCAA TCAGGTTCAT
CTGAAGGCCG GCTTCCCGGA TGCCGCCACG GGTGTCTATC AAACCGTGTT GGCCAATATT
CTGGCGACTC CCTTGAAGGT GCTGGCGCCC TTGTTGTGGT CGCATGTGGC GCCCGGCGGC
TCGCTGGTAT TGGCCGGCAT TCTTGGCACC CAAGCTGATG AGCTGAAAGC GGCTTACGCA
CCCTATTGCC AATTGGTGAT TTCGGATCAG CAAGAGGGCT GGATATTGAT GACCGCGTCA
AACTGA
|
|---|
| Protein sequence | MFELTLMCPE NRVGTLSDTL EALDALSVSI EDADAQTDAE QALFGEPGMP PPKTGWQRSR
VSALYASEVL AKEALDLLQA QDFFADCQLL GMQAVAEQDW VRLTQSQFTP VEITPEFWIV
PTWHEPPAQA RIVIRLDPGL AFGTGTHPTT RMCLRWIAQR GHGDESTVNH ALGRVLDYGC
GSGILAIGAA KYGATDIDAV DIDDAAVEST VLNAQANQVH LKAGFPDAAT GVYQTVLANI
LATPLKVLAP LLWSHVAPGG SLVLAGILGT QADELKAAYA PYCQLVISDQ QEGWILMTAS
N
|
|---|
| |