Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3348 |
Symbol | |
ID | 3963047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3718649 |
End bp | 3719851 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637918168 |
Product | ribonucleotide-diphosphate reductase subunit beta |
Protein accession | YP_524588 |
Protein GI | 89902117 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.443517 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGACCT GGGACGAAGA AGTCAAGCCC ACACCGCCAT TGCCTCATAC ACGCGGCTCA TCCAGCAGCC GCTCGACGGA GCCGTCGCTG GCATCTGCCG AGGTTCACTC GCTGCATGAT GGTGCGGCCC GTCCAGCCCT AGCCGTCACA GCGAACCAGC GCGGTGCAGC AGTTTCCATC AGCCCCCGCC GCGTCAATGC CGCTGACAAG CGAATCATCA ATGGCAAGAC CGACGTCAAC CAGCTCGTTC CCTTCAAGTA CAAGTGGGCT TGGGAGAAAT ATCTCTCCAG CTGCGCCAAC CACTGGATGC CACAAGAAGT CAACATGACG CGTGACATTG CGCTGTGGAA AGATCCCAAC GGGCTGACTG AAGACGAGCG TCGCATCATC AAACGCAATC TGGGTTTTTT CGTCACCGCA GACTCACTGG CGGCCAACAA CATTGTGCTG GGCACCTATC GCCATATCAC AGCGCCTGAG TGTCGGCAGT TCTTGTTGCG TCAGGCCTTT GAAGAAGCCA TTCACACCCA TGCTTATCAG TACATCGTGG AGTCTTTGGG TCTCGATGAA AGTGAAATCT TCAACGCCTA CAACGAAGTC CAGTCCATCC GCGACAAAGA CGAGTTTTTG ATCCCCTTCA TTGAAGCCAT CATGGATCCG GCATTCAAAA CCGGAACTCA CGAGGCAGAC CAGACCCTGT TGAAGTCGCT GATCGTGTTT GCCTGCCTGA TGGAAGGGCT GTTTTTCTAT GTTGGCTTTG CGCAAATTCT GGCTTTGGGG CGTCAAAATA AAATGACCGG AGCTGCCGAG CAGTACCAGT ACATCCTGCG CGATGAGTCC ATGCACTGCA ACTTTGGCAT TGACCTGATC AACCAGCTCA AGCTTGAAAA CCCGCAGTTG TGGACATCAG AGTTCAAGGC TGAAATCAAG GCATTGTTCG AGCAGGCTGT CGAACTGGAA TACCGCTACG CTGAAGACAC CATGCCTCGC GGCGTGCTGG GTATGAATGC GTCCATGTTC AAAGGCTACT TGCGCTATAT CGCCAACCGC CGCGCCACGC AGATCGGTCT CGAGACACTT TTCCCCAATG AAGAGAATCC GTTCCCGTGG ATGAGCGAAA TGATTGACCT CAAGAAAGAA CGCAACTTTT TTGAGACCCG CGTGATTGAA TATCAATCCG GTGGTGCGCT GTCCTGGGAT TAA
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Protein sequence | MLTWDEEVKP TPPLPHTRGS SSSRSTEPSL ASAEVHSLHD GAARPALAVT ANQRGAAVSI SPRRVNAADK RIINGKTDVN QLVPFKYKWA WEKYLSSCAN HWMPQEVNMT RDIALWKDPN GLTEDERRII KRNLGFFVTA DSLAANNIVL GTYRHITAPE CRQFLLRQAF EEAIHTHAYQ YIVESLGLDE SEIFNAYNEV QSIRDKDEFL IPFIEAIMDP AFKTGTHEAD QTLLKSLIVF ACLMEGLFFY VGFAQILALG RQNKMTGAAE QYQYILRDES MHCNFGIDLI NQLKLENPQL WTSEFKAEIK ALFEQAVELE YRYAEDTMPR GVLGMNASMF KGYLRYIANR RATQIGLETL FPNEENPFPW MSEMIDLKKE RNFFETRVIE YQSGGALSWD
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