Gene Rfer_3321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3321 
Symbol 
ID3962962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3685863 
End bp3686429 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content51% 
IMG OID637918141 
ProductRNA polymerase factor sigma-70 
Protein accessionYP_524561 
Protein GI89902090 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.39215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCCACTG AAAAAGAACT TTCTGATTTT CTGAAAGACG TTGAAAAACG TGCCTTCAAA 
CGGTCCGTTT ACCACGTTCG CAACGTGGAG TCTGCACTGG ATATCGTGCA AGACAGCATG
ATGAAGCTGG CCGTGCACTA CGGTGACAAG CCGGTCGCCG AGTTGCCAAT GCTGTTCCAA
CGCATTCTGT CCAACTGCAC GCTTGACTGG TTTCGGCGCC AAAAAACCCG CAATGCGCTT
TTCTCCAACC TGAGTGATTT TGAATCTGAA GGAGAAGACG GCGAATTTGA CCTGCTGGAA
ACTTTAAACA CCCAAAACCA CTCGAACCAA ACAGAGAGTG CGGAGAGTTC CACTCAGCGG
GCACAAACCT TGCATGAAAT TGAAAACGAA ATTCAGGCAC TTCCAACCCG TCAACGGGAA
GCCTTCCTCA TGCGTTATTG GGAGGAATTG GACGTGGCAG AGACTGCTGC GGCCATGGGG
TGTTCAGAAG GCAGTGTCAA AACCCACTGT TCGCGGGCAG TTCAGGCCCT CGGCAAAGCA
TTGAGGGTGA AGGGAATCAC GTTATGA
 
Protein sequence
MATEKELSDF LKDVEKRAFK RSVYHVRNVE SALDIVQDSM MKLAVHYGDK PVAELPMLFQ 
RILSNCTLDW FRRQKTRNAL FSNLSDFESE GEDGEFDLLE TLNTQNHSNQ TESAESSTQR
AQTLHEIENE IQALPTRQRE AFLMRYWEEL DVAETAAAMG CSEGSVKTHC SRAVQALGKA
LRVKGITL