| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3303 |
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| Symbol | |
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| ID | 3962888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3666648 |
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| End bp | 3668072 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637918123 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_524543 |
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| Protein GI | 89902072 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.125384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGGC GCGACCTGCT GCAGTCCGGT GCCCTCGTGC TGTTGCTGGG CGCACAGCAC
CTGGCCCGGG GCGCCACCAT CCTGGCGGTG CGGGTGTGGC CGGCGCCCGA CTACTCGCGC
GTCACCATTG AGTCCGACAC GGCCCTCAAG GTCAAACAGT TTTTTATCGC CAACCCGCCG
CGCCTGGCGG TGGACATCGA GGGCATCGAA CTCAACCCTG CGCTCAAGGA ACTGGTGGCC
AAGGTGCGCA GCGACGACCC CAATATTGCG GGTATTCGGG CCGGACAAAA CGCGCCGGGC
ACGGTGCGTC TGGTGCTGGA CTTGAAGCAG CCCATAGCCC CTCAGGTCTT CACGCTGACG
CCGGTCGCCG CCTACCAGCA CCGGCTGGTG TTCGATTTGT ACCCCACGCA GGTGAGTGAC
CCGCTGGAGG CGCTGATTGC CGATCGGATC AAAGACCAGG CGCGGGCAAG CCCCGGCCCT
GCCACCCCCG TCACGGGCGA TCCTTTGGGT GAACTGATCG CCCAGCACAC CCAGCGACCC
CCTCTCAAGC TGGGTGGCCC GGATTCAGTC CTGAACACGG CCAACGCCAA AATTACTAGC
AATTCAGTAG CTAATAGTGA CCAATCCACG GGGGCCAAGG GCCAAAAAGG TATCAATATT
TTCGGTACGG ACAACGCGCC GGTCCAGTCG CCTGCCGTCA CCGACCGCTT GATCATCATT
GCCCTTGACC CCGGCCACGG CGGTGAAGAT CCCGGCGCCA TCGGCCCCGG CGGCACGCGG
GAAAAAGACG TGGTGTTGCG CCTGGCGCAC CGATTGCGCG ATCGCATTAA TGCCACCGTC
ATCAAGGGCA ACACCATGCG CGCCTACCTC ACGCGCGACG CCGACTTCTT TGTGCCGCTG
CATGTGCGGG TACAAAAGGC GCGCCAGGTC CAGGCGGACC TTTTTGTCAG CCTGCATGCC
GACGCCTTCT TCACCCCGCA TCCGCAGGGC GCCAGCGTGT TTGCCCTGAG CCAGGGCGGC
GCCTCCAGCA GTGCGGCGCG CTGGATGGCA GCGAAGGAAA ACAAGGCCGA CCTGATCGGT
GGCTTGAATG TCAAGGCCCG GGACGCCCAA GTGACGCGGG CCCTGTTTGA CATGAGCACC
ACCGCCCAGA TCAACGACAG CCTGAAGCTC GGCAGCGCCA TGCTGGGTGA AATTGGCCGA
GTTGGCAAGC TGCACAAAGG CCGGGTCGAG CAAGCCAGCT TTGCCGTTCT GAAGGCGCCC
GACATCCCCA GTGTGCTGGT GGAGGCTGCT TTTATCAGCA ACCCGGAAGA AGAGATCAAA
CTCAACAGCG AGGCCTACCA GGAGCAGTTG GCCAGCGCGC TGATGCGCGG CATTGAAGGC
TACTTCTCCA AAAATCCGCC GCTGGCCCGA AATCGTTCGG TTTAA
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| Protein sequence | MKRRDLLQSG ALVLLLGAQH LARGATILAV RVWPAPDYSR VTIESDTALK VKQFFIANPP
RLAVDIEGIE LNPALKELVA KVRSDDPNIA GIRAGQNAPG TVRLVLDLKQ PIAPQVFTLT
PVAAYQHRLV FDLYPTQVSD PLEALIADRI KDQARASPGP ATPVTGDPLG ELIAQHTQRP
PLKLGGPDSV LNTANAKITS NSVANSDQST GAKGQKGINI FGTDNAPVQS PAVTDRLIII
ALDPGHGGED PGAIGPGGTR EKDVVLRLAH RLRDRINATV IKGNTMRAYL TRDADFFVPL
HVRVQKARQV QADLFVSLHA DAFFTPHPQG ASVFALSQGG ASSSAARWMA AKENKADLIG
GLNVKARDAQ VTRALFDMST TAQINDSLKL GSAMLGEIGR VGKLHKGRVE QASFAVLKAP
DIPSVLVEAA FISNPEEEIK LNSEAYQEQL ASALMRGIEG YFSKNPPLAR NRSV
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