| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3288 |
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| Symbol | |
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| ID | 3962435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3650271 |
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| End bp | 3651830 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637918108 |
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| Product | NADH-ubiquinone oxidoreductase, chain 49kDa |
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| Protein accession | YP_524528 |
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| Protein GI | 89902057 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3261] Ni,Fe-hydrogenase III large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.14856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTT CTGGCTTCGA CGTTGATCTC CAATGTGTGA TGGCACCCGT GCCGATCTGG
CACGCGCGGG TCACCGTGGA TGAGTGGCGC GCCGCCGCTG CGGCCGTGCG CGAGGGGGGC
GGGCGCTTGC TGGCGATGTG GGGCGGAGCA GGGCTGGCGG ACGAGCCAAC GGTGCTTGCC
TGCGCCGCCT ATGTGGTGTT GGAGGGTTTG ATCTGGCTGG AGTTGCCACA GAGCGGCGAG
CAGCTGACTT ATCCTGACCT GCTGCCTTTC TTTCCCGCCG CCGCCAGAAT GCAGCGGGCC
GCGGCCGAGT TGTCGGGTAT TCGCACCAAG GGCAGCAAAG ACCAGCGTCC GTGGCTGAAC
CACGGTGCCT GGCCCCTGGA CTATTTTCCC CTGCGCCACG CCGGCGAGGC GCCGCCGCCA
TTTCCTGAGG AAGCCTTGGT CGATTACCCG TTCGTCCGCG TCGAAGGCGA TGGCGTGCAT
GAAATCGCGG TGGGTCCGGT GCATGCCGGC ATCATTGAGC CTGGGCATTT TCGCTTTTCG
GTGGTCGGCG AAAAAGTACT GCGCCTGGAG CAGCGCCTGG GCTACACACA CAAGGGTATT
GAGCAGCGCA TGACCCAGTT GGACCCGCTG CTGGCGTATC GCCTGGCCGG TCGGGTCTCG
GGTGACTCAA CCGTCGCCTA CGCCTGGGGT TATTGCATGG CCTTGGAGTC GGCCAGCGCC
TGCGCGGTGC CGCCCCGGGC CTTGTGGATG CGCGCCTTGA TGCTCGAGCG CGAGCGCGTT
GCCAACCATC TGGGTGATCT GGGGGCCTTG GGCAACGACG CCGCCTTCGC GTTTGGCCTG
GCCCAATTTT CCCGTCTGCG CGAAGACTGG CTGCGCTTGT CCAAGGAGAT GTTTGGACAC
CGTTTGATGA TGGACTGCGT GCTGCCCGGC GGTGTGACGC ATGACATTCA TGGCGCCCAT
ATTGACCAAC TGACCCGGCA ATGCGACGCT GTGGAGCGCG AGGTGCGGAC CTTGCGTTCA
ATCTACGAAG AGCATGCCGG CTTGCAGGAT CGCTTCATGA CCACCGGGCG GGTTACGCCG
GCGCTGGCGG CCCAGTTGGG CTTGACCGGT CTGGCCGGGC GGGCCAGTGC ACAGGCGTGG
GACTTGCGCT GTGATCATGC GGCTGCGCCG TATGACGTAT TGCAGGTCAA GATGGCCACG
CACAGCAATG GCGACGTGGC AGCCCGAGTG AGCGTGCGCT TTGATGAAGT GTTTGAGTCG
ATGCGGCTGA TCCGGCAAAT TCTTGCCGGT CTGCCAGCCG GCCCCTTGCG CCAGGACATT
GCTTTGCCCG GGCAGGCGAG CCGCGGGGCG GGTTGGGTGG AGGGCTGGCG GGGCGAGATT
TTTGTCGCGC TGGAGCTGAG CGGTGCCAGC AGCGATCAGC GCATTCGACG CTGCCATTTG
CATGATCCCT CCTGGCAGAA CTGGCCCGTG CTGGAGCACG CCGTCATGGG CAATATCGTG
CCCGACTTTC CGCTCATCAA CAAGTCGTTC AACCTCAGCT ATTCCGGGCA CGATTTATGA
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| Protein sequence | MKISGFDVDL QCVMAPVPIW HARVTVDEWR AAAAAVREGG GRLLAMWGGA GLADEPTVLA
CAAYVVLEGL IWLELPQSGE QLTYPDLLPF FPAAARMQRA AAELSGIRTK GSKDQRPWLN
HGAWPLDYFP LRHAGEAPPP FPEEALVDYP FVRVEGDGVH EIAVGPVHAG IIEPGHFRFS
VVGEKVLRLE QRLGYTHKGI EQRMTQLDPL LAYRLAGRVS GDSTVAYAWG YCMALESASA
CAVPPRALWM RALMLERERV ANHLGDLGAL GNDAAFAFGL AQFSRLREDW LRLSKEMFGH
RLMMDCVLPG GVTHDIHGAH IDQLTRQCDA VEREVRTLRS IYEEHAGLQD RFMTTGRVTP
ALAAQLGLTG LAGRASAQAW DLRCDHAAAP YDVLQVKMAT HSNGDVAARV SVRFDEVFES
MRLIRQILAG LPAGPLRQDI ALPGQASRGA GWVEGWRGEI FVALELSGAS SDQRIRRCHL
HDPSWQNWPV LEHAVMGNIV PDFPLINKSF NLSYSGHDL
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